| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1456 |
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| Symbol | |
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| ID | 6088686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1606146 |
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| End bp | 1608572 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641596525 |
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| Product | anaerobic dimethyl sulfoxide reductase subunit A |
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| Protein accession | YP_001720202 |
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| Protein GI | 170023697 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA ATAAAACACC GCTCACCGGC TCACTGAGTC GTCGTGAATT TATTCAAACA
TCCGCCGTAG TGACCGGGGC TGCGGCAATT GCCGGTTCAA TCACCCTCCC ATTCTCCGTC
CATGCTGCGG CTTCAGAACA TGCCCCCACG GCGGCTGAAG AGAGCATTAA ATACAGTGCT
TGTCTGGTTA ACTGTGGCAG CCGCTGTCCG CTAAAAGTTC ATGTTAAAAA TGGTGAAATA
ATTAAAATTG CTAATGAAGC CATTTATGAT GATTCCACCT TTGGCTTACA CCAAATTCGC
CCCTGCTTAC GTGGCCGTTC AGTACGATGG AAAACCTATA ATCCGGATCG GGTTAAATAT
CCGATGTTGC GAGTGGGTAA ACGCGGTGAA GGTAAATTCA AGCGTATCAG TTGGGATGAA
GCCACAACTA TAGTTGCGGA TAATCTGAAA AAAACGATTG TTCAATACGG CAACGAAGCG
ATTTATTATC AATATGGCTC TGGTTCAACC GGGGCTAATT TACAAGGCCG CAATGCCTGT
AAACGTATGT TGAGTTTGAT CGGCGGTTAT CTTGATCAGC ACGGCACTTA TTCTACCGCC
CAAATCAATA CCGTCATGCC TTATGTCTAC GGCAACTTAG ATGAAACACT ACTGGACGAA
ATTAAAAATT CTGATCTGGT GGTGATGTTT GGTCACAATC TGGCAGAAAC ACGGATGTCA
GGCGGTGGGC AATATATTGA AACGGTTCAG GCGTTGGGTC AAAGCCGAGC CAAAGTCATT
ATTATTGACC CACGCATGAC CGACAGTGTG ACCACCCTTA ACGCCGAATG GATCCCGATA
TTCCCAGGGA CCGATGCGGC ACTGGTCGCC GCGCTGGGGC ATGTTTTAAT TAAAGAGAAT
CTGACTGACG AACGTTTCCT GCAACAATAT TGTGTCGGTT GGGATGCCAC CACATTGCCC
GCATCGGCCC CAGCTAACGG ATCGTATAAA GATTATATTT TAGGTCTGGG TGCTGACGAA
ACCGAAAAAA CACCAGAATG GGCCAGTGAG ATAACCGGTA TTTCACCAAC ACGTATTATT
CAATTAGCCA GAGAACTGGG TAATGCCCGC GCAGCCTGGA TTTCACAGGG TTGGGGAATT
CAACGCACAG CGAACGGGGA GCAAGCGTCC CGCTCGATTA TGATGCTCCC ATTAATGACC
AGTAATATTG GCCGTGCCGG AACCAATACC GGTGCCTGGG GTGGCAACGT AAAATACCCG
GTTCCCGGAT TCAGCATTCC CAATCCAGTC AAAACGGCCA TTCCTTGCTT TATGTGGACC
GATGCTATTT TCCGCGGCAC TGAAATGACC GCTAAAAATG CCCATGTGAA AAATAAAGAA
AAACTGGATA CCAATATTAA GTTTCTCTGG AACTACGCCA GTAATGTTAT AGCAAATCAG
CACTCTGATC TGAATAAAAC CAATACTATT TTGCAAGATG AGTCATTGTG CGAATTTATT
TTGGTCTGGG AAAACCATAT GACCAATTCG GCGAAATACG CGGATTTATT ATTGCCAGAC
GTCACGTCGG TTGAATCAAA TGACCTGATT GATAACTCCT ATGCCAGTGG CGCTTATCAC
TATGTCACCC GGATGCAAAA TACCATTGAG CCGCTGTGGG AATGCCGCCC CTCATACGAT
GTATTAGCCG AGATTGCCAC CAAATTAGGC GTGGGGGATG CCTTTACTGA AGGACATACC
CAGCAAGAAT GGATTGAAAT CAGCTATAAC AAAATGCGTG ATAAAAATCC GGCGCTGCCG
CCTTTCAGTG ACACCCATAA CAAAGGCATT ATTGACCGTA TTTTTGCTGA CAGTAGCCAA
TATATCGCGT TAAAAGATTT CCGCGATGAT CCAGTAAATA ACCCGTTAAA AACCCCATCA
GGCAAGATTG AGATCTATTC CGAAGCACTG GCAACACTCG CACACGAGTG GCAGTTGGCG
CCGGGTGATC GCATTACCGC AGTGGCTGAA TATTGTCCGA CCCCTGAGGG CGTCAGTGAT
CAGGAGACCC TGAAGAGCTA CCCTCTGCAA ATGACCGGTT TCCATGTTAA AGGCCATACC
CACTCAACCT ATTACAATGT CGCGATGCTG CGCGAAGCGG TGCCTCATCA ATTCTGGATG
AACCCGATTG ATGCACAGGC GCGTGGCATA CAGCAAGGCG AGCGGGTCGA AATATTTAAT
AGCCGTGGCC GTATCCATAT TGCGGTCAAA ATTACTGAGC GGGTATTACC GGGGGTTATT
GCTGTGCCAC AAGGGGCATG GCGTAATCTC AACAAGGACG GTATCGACGT GGGTGGCTGT
ATCAATACGT TGACGACACA ACGCCCTTCG CCATTGGCGA AAGGTAATCC TCAACACACC
AACCTCGTTG AAGTAAAACG TGCATAA
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| Protein sequence | MNNNKTPLTG SLSRREFIQT SAVVTGAAAI AGSITLPFSV HAAASEHAPT AAEESIKYSA
CLVNCGSRCP LKVHVKNGEI IKIANEAIYD DSTFGLHQIR PCLRGRSVRW KTYNPDRVKY
PMLRVGKRGE GKFKRISWDE ATTIVADNLK KTIVQYGNEA IYYQYGSGST GANLQGRNAC
KRMLSLIGGY LDQHGTYSTA QINTVMPYVY GNLDETLLDE IKNSDLVVMF GHNLAETRMS
GGGQYIETVQ ALGQSRAKVI IIDPRMTDSV TTLNAEWIPI FPGTDAALVA ALGHVLIKEN
LTDERFLQQY CVGWDATTLP ASAPANGSYK DYILGLGADE TEKTPEWASE ITGISPTRII
QLARELGNAR AAWISQGWGI QRTANGEQAS RSIMMLPLMT SNIGRAGTNT GAWGGNVKYP
VPGFSIPNPV KTAIPCFMWT DAIFRGTEMT AKNAHVKNKE KLDTNIKFLW NYASNVIANQ
HSDLNKTNTI LQDESLCEFI LVWENHMTNS AKYADLLLPD VTSVESNDLI DNSYASGAYH
YVTRMQNTIE PLWECRPSYD VLAEIATKLG VGDAFTEGHT QQEWIEISYN KMRDKNPALP
PFSDTHNKGI IDRIFADSSQ YIALKDFRDD PVNNPLKTPS GKIEIYSEAL ATLAHEWQLA
PGDRITAVAE YCPTPEGVSD QETLKSYPLQ MTGFHVKGHT HSTYYNVAML REAVPHQFWM
NPIDAQARGI QQGERVEIFN SRGRIHIAVK ITERVLPGVI AVPQGAWRNL NKDGIDVGGC
INTLTTQRPS PLAKGNPQHT NLVEVKRA
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