Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1438 |
Symbol | |
ID | 6088354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1589137 |
End bp | 1590321 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641596507 |
Product | nucleoside transporter |
Protein accession | YP_001720184 |
Protein GI | 170023679 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0187769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCATA TTCTACAGTT TGCGTTAGCC CTCGTTGTGG TAGCTATACT GGCTTTGGCA ATCTGTAAAG ATCGTAAAAG CATCCGTATT CGATTTGTTA TTCAATTGTT GGTTATAGAA GTGTTGCTGG CATACTTCTT CCTCCATTCG GAAGCTGGAC TGGGTTTTGT GAAAGGATTC GCAGGGTTTT TCGACACATT GCTAGGATTT GCAGCCGCCG GTACCGATTT TGTCTTTAAT GATATGGGTG ATAAAGGTCT CGCGTTCTTC TTCCTAAGAG TGTTGTGTCC TATTGTCTTT ATTTCTGCAT TAATCGGTAT TTTGCAATAC ATCAAAGTTT TGCCGATCGT CATTCGTCTG ATCGGTACAT TACTGTCCAA AGTTAACGGT ATGGGCAAAC TGGAATCATT CAACGCCGTC AGTTCACTGA TTCTCGGACA ATCTGAAAAC TTTATTGCCT ATAAAGATAT TTTGGGCAAG ATGTCTGAAA AACGCATGTA CACCATGGCG GCAACAGCAA TGTCGACCGT TTCCATGTCG ATTGTTGGCG CTTATATGTC CATGCTGGAT GCGAAATTTG TGGTCGCCGC CTTGGTACTC AACATGTTCA GTACCTTTAT CGTGTTGTCA TTGATCAACC CGTACAAAGT GGGCGAAGAA CAAGATTTGC AACTGAGTAA TCTGCATGAA GGCCAAAGCT TCTTTGAAAT GCTGGGAGAA TATATTCTGG CTGGTTTCAA AGTAGCCATT ATCGTTGCTG CAATGTTGAT TGGTTTCATC GCGTTGATTG CTGCGGTGAA TGCTCTATTC ACCTTACTGT TCGGTATTAG CTTCCAAGGA ATTTTGGGTT ATGTGTTCTT CCCGTTTGCT TGGGTGATGG GTATCCCTGC CCATGAGGCC TTACAGGTCG GGAGTATCAT GGCAACCAAA CTGGTTTCTA ACGAATTCGT GGCAATGATG GATTTGCAGA AAGTCGCTTC TCAACTTTCA CCACGCAGTG TGGGTATCCT GTCCGTGTTC TTGGTTTCAT TCGCTAACTT CTCTTCTATC GGTATCGTCG CCGGTGCGAT TAAAGGCCTG AATGAGCATC AAGGTAATGT GGTTTCCCGT TTTGGTCTGA AGCTGTTGTA TGGCTCCACG TTGGTCAGTG TGCTGTCTGC TTCTATCGCG GGCTTGGTGC TCTAA
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Protein sequence | MSHILQFALA LVVVAILALA ICKDRKSIRI RFVIQLLVIE VLLAYFFLHS EAGLGFVKGF AGFFDTLLGF AAAGTDFVFN DMGDKGLAFF FLRVLCPIVF ISALIGILQY IKVLPIVIRL IGTLLSKVNG MGKLESFNAV SSLILGQSEN FIAYKDILGK MSEKRMYTMA ATAMSTVSMS IVGAYMSMLD AKFVVAALVL NMFSTFIVLS LINPYKVGEE QDLQLSNLHE GQSFFEMLGE YILAGFKVAI IVAAMLIGFI ALIAAVNALF TLLFGISFQG ILGYVFFPFA WVMGIPAHEA LQVGSIMATK LVSNEFVAMM DLQKVASQLS PRSVGILSVF LVSFANFSSI GIVAGAIKGL NEHQGNVVSR FGLKLLYGST LVSVLSASIA GLVL
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