| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1387 |
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| Symbol | |
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| ID | 6089760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1528809 |
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| End bp | 1531301 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641596451 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_001720134 |
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| Protein GI | 170023629 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA GTCGCCGGGA CTTTATGAAA GCGAATGCGG CCGTTGCTGC GGCGGCTGCC
GCCGGAATGA CCATACCTAC TGTCGCTAAA GCGGTGGGTG AGACAACCAA TGCGATCAAG
TGGGATAAAG CACCTTGCCG ATTCTGCGGC ACCGGCTGCG GTGTACTGGT AGGAACGCAA
AATGGCCGTA TCGTGGCCTC ACAAGGTGAC CCGGACTCAC CGGTTAACCG TGGGCTGAAC
TGCATCAAAG GCTATTTCCT GCCAAAAATC ATGTACGGCA AAGACCGGCT GACACAGCCC
TTGCTGCGTA TGAAAGACGG TCAATACGAT AAAGAAGGCG ATTTCACCCC AATAAGCTGG
GAGAAAGCCT TTGATATCAT GGAACTGAAA TTCAAAAATG CGCTAAAAGA GAAAGGCCCG
ACCGCGGTCG GTATGTTCGG CTCCGGGCAA TGGACCGTGT GGGAAGGCTA CGCGGCGTTG
AAGTTGCTGA AAGGGGGGTT CCGCTCAAAT AACCTTGATC CTAATGCCCG CCATTGTATG
GCGTCCTCGG TTGTTGGATT CATGCGTACC TTCGGTATGG ATGAGCCGAT GGGGTGCTAC
GATGATATTG AAGAAGCCGA TGCCTTCGTG CTCTGGGGCT CCAATATGGC GGAAATGCAC
CCGGTATTAT GGTCGCGTAT GACCAGCCGC CGCCTGACCA ATGCGCATGT CAGAATTGCC
GTCCTCTCCA CTTACGAACA CCGCAGTTTT GAATTGGCCG ACAACCCGAT CGTCTTTACC
CCACAAACCG ATCTGGTCAT CATGAATTAC ATCGCCAATT ACATCATTCA AAATAATGCC
GTTGATAAAG ACTTCCTGGC TCAACACGTG AATTTCCGCC GCGGCGCGAC CGATATCGGC
TATGGCTTAC GGCCAACCCA TCCGTTGGAA AAAGCGGCGA AGAATCCCGG CAGCGATGCT
TCTGAACCGA TGAGTTTTGA GGATTTCAAA ACCTTTGTCG CTGAATACAC GTTAGAAAAA
ACCGCCAAAA TGAGCGGTGT ACCAGAAGAT CAGCTTGAGT CGTTGGCCCA GTTGTATGCT
GATCCAAAGG TGAAATTGGT CTCTTACTGG ACCATGGGCT TTAACCAGCA TACCCGCGGC
GTGTGGGCCA ACAACATGTG CTACAACCTG CACCTGTTAA CCGGCAAGAT CTCCACGCCG
GGATCGGGGC CTTTCTCCCT GACGGGGCAG CCTTCCGCGT GTGGCACCGC CCGCGAAGTG
GGGACATTCT CCCATCGCCT GCCTGCAGAT ATGGTGGTCA CGAACGAAAA ACATCGGCAG
ATTGCTGAAA CCACATGGCA GTTACCGGCG GGGACCATCC CGGAAAAAGT GGGTTTACAT
GCGGTAGCAC AAGATCGGGC GCTGAAAGAC GGCACCCTCA ACGCCTACTG GGTGATGTGC
AACAACAACA TGCAGGCCGG ACCGAATATT AATGAAGAGC GTATGCCGGG CTGGCGTGAT
CCGCGCAACT TTATTGTGGT CTCCGATCCC TATCCCACCA TCAGTGCGCT GTCTGCTGAC
TTGATTTTAC CGACCTCAAT GTGGGTCGAG AAAGAGGGCG CATACGGCAA TGCTGAACGC
CGTACTCAAT TCTGGCGTCA GCAAGTCCCC TCACCGGGGG AGGCTAAATC GGATTTATGG
CAAATCGTCG AGTTCGCCAA ACGCTTTAAC GTCGAAGAAG TCTGGCCCGC TGAGTTGGTG
AATCAAAAAC CTGAGTATCG CGGTAAAAAT TTATATGAGG TGCTGTTTGC CAACGATGTA
GTCAGTAAAT ACCCACTGAG CGAGATCCCT GACGATCAAT TGAACGACGA AGCGCGCGAT
TTTGGTTTCT ACATACAGAA AGGATTATTT GAAGAGTACG CCAGCTTTGG GCGTGGGCAC
GCTCATGATC TGGCTCCTTT CGATGTATAT CATCAGGTAC GCGGCCTGCG CTGGCCGGTG
GTTGACGGTA AGGAAACACT CTGGCGCTAC CGTGAAGGTT TTGATCCCTT CGTACCGAAA
GGCGAAGAGG TGCGCTTCTA TGGCAAACCA GACGGTAAGG CGGTCATTTT TGCCCTGCCT
TATGAACCAG CAGCAGAAAG CCCGGACCAA GAATATGACC TGTGGCTCTC TACCGGCCGG
GTGCTGGAAC ATTGGCACAC GGGTTCAATG ACCCGCCGGG TACCTGAATT GCACCGTGCT
TTCCCAGAGG CCGTGTTATT CATTCATCCA TTGGATGCCA AAGCGCGTGG TTTACACCGT
GGTGACAAAG TGAAAGTGAT TTCACGCCGA GGTGAGGTTA TTTCTCTGGT TGAAACCCGT
GGCCGTAACC GCCCACCGCG AGGGCTGGTG TACATGCCGT TCTTCGATGC CGCACAGTTG
GTCAATAACC TGACCTTAGA CGCGACCGAT CCGCTCTCGA AAGAAACTGA CTTTAAGAAA
TGCGCAGTGA AACTGGAACG GGTAGTGGCC TGA
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| Protein sequence | MKLSRRDFMK ANAAVAAAAA AGMTIPTVAK AVGETTNAIK WDKAPCRFCG TGCGVLVGTQ
NGRIVASQGD PDSPVNRGLN CIKGYFLPKI MYGKDRLTQP LLRMKDGQYD KEGDFTPISW
EKAFDIMELK FKNALKEKGP TAVGMFGSGQ WTVWEGYAAL KLLKGGFRSN NLDPNARHCM
ASSVVGFMRT FGMDEPMGCY DDIEEADAFV LWGSNMAEMH PVLWSRMTSR RLTNAHVRIA
VLSTYEHRSF ELADNPIVFT PQTDLVIMNY IANYIIQNNA VDKDFLAQHV NFRRGATDIG
YGLRPTHPLE KAAKNPGSDA SEPMSFEDFK TFVAEYTLEK TAKMSGVPED QLESLAQLYA
DPKVKLVSYW TMGFNQHTRG VWANNMCYNL HLLTGKISTP GSGPFSLTGQ PSACGTAREV
GTFSHRLPAD MVVTNEKHRQ IAETTWQLPA GTIPEKVGLH AVAQDRALKD GTLNAYWVMC
NNNMQAGPNI NEERMPGWRD PRNFIVVSDP YPTISALSAD LILPTSMWVE KEGAYGNAER
RTQFWRQQVP SPGEAKSDLW QIVEFAKRFN VEEVWPAELV NQKPEYRGKN LYEVLFANDV
VSKYPLSEIP DDQLNDEARD FGFYIQKGLF EEYASFGRGH AHDLAPFDVY HQVRGLRWPV
VDGKETLWRY REGFDPFVPK GEEVRFYGKP DGKAVIFALP YEPAAESPDQ EYDLWLSTGR
VLEHWHTGSM TRRVPELHRA FPEAVLFIHP LDAKARGLHR GDKVKVISRR GEVISLVETR
GRNRPPRGLV YMPFFDAAQL VNNLTLDATD PLSKETDFKK CAVKLERVVA
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