Gene YPK_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1361 
SymbolgcvR 
ID6091225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp1502098 
End bp1502712 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content48% 
IMG OID641596425 
Productglycine cleavage system transcriptional repressor 
Protein accessionYP_001720108 
Protein GI170023603 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.243595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACCA TGGTAACCCC AAAGAGCATG ACAGGAAGAG CGATTTTGCC GCAGCTTGAT 
GAACATTATC TGGTCATTAC CGCACTCGGT GCTGACCGCC CAGGGATCGT CAATACCATC 
ACCCGCCATG TCAGTAGCTG CGGTTGTAAT ATTGAAGATA GTCGGCTGGC TATGTTCGGT 
GAGGAGTTCA CCTTTATTAT GCTGCTGTCA GGCAGTTGGA ACGCCGTTAC CCTGCTGGAA 
TCAACTCTGC CGCAAAAAGG TGCAGAGCTT GATTTGCTGA TTGTCATGAA GCGAACCAAC 
GCTCAAGGGC AGAAAGCTAT GCCAACCACT GTCTGGGTAA AAGTTGAAGT GAATGACTCC 
CCCCACATTA TTGAACGGTT TACCAACCTG TTCCATTGCC ACAATATGAA TATCGCGGAG 
TTAGTCTCCA AAACTCAGCC GGCAGACGGC GAGACACCGC CATTGCTACA TATACAGATG 
AGTGCACACA GTCCTGCCAG CCAAAACAGT TCAATAATCG AACATGATTT TTATCAACTC 
TGTACAGAAC TCAACGCGCA GGGCAGTATT AGCGTGGTGA GCTATCCACA GCATGATGAC 
CGAATGGAGA GTTAG
 
Protein sequence
MFTMVTPKSM TGRAILPQLD EHYLVITALG ADRPGIVNTI TRHVSSCGCN IEDSRLAMFG 
EEFTFIMLLS GSWNAVTLLE STLPQKGAEL DLLIVMKRTN AQGQKAMPTT VWVKVEVNDS 
PHIIERFTNL FHCHNMNIAE LVSKTQPADG ETPPLLHIQM SAHSPASQNS SIIEHDFYQL 
CTELNAQGSI SVVSYPQHDD RMES