Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1336 |
Symbol | |
ID | 6090122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1472988 |
End bp | 1474016 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641596400 |
Product | extracellular solute-binding protein |
Protein accession | YP_001720083 |
Protein GI | 170023578 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA TAATAACACT GACTACGCTG CTCGCCGGAT GGGTATTTCA AACGCACGCT GAAACCCTGA CGGTGGTGTC ATTCGGTGGT TTAAACAAAG ACGCACAGGT TAAGGCGTTC TATAAACCTT TCATGGCCGC CGGGAAAGGA ACAATTGAAG CCGGGGAGTA TAACGGTGAA ATGGCCCGTA TCCGTGCGAT GGTGGAAACG GGTCAAATAG GGTGGGATAT CGTCGAAGTT GAAGGCCCAG AACTGCTACG GGGATGCAAT GAAGGGCTAT TTGAAACCCT GGATTGGAGC AAGTTAGGCG ATGAACGTCA GTTCATTAAA GGCACGGTTA GCCAATGTGG TTCGGGTCTT TTTTTGTGGT CAATGCTATT AATCTACGAC GCCAGCAAAT TTAAAACCCC GGTGACCAGT TGGGCTGACT TCTGGAATGT CACCACTTTT CCCGGCAAAC GTTCCCTGCG CAAAACTGCC AAATTTACCA TGGAAATTGC GTTGCTGGCG GATGGCGTGA AACGTGAGGA TGTGTATCGT GTGCTGGCGA CGCCGGAAGG TGTTGAACGT GTTTTCAACA AACTGGATCA ACTTAAACCG AATATCCAGT GGTGGGAATC TGGGGCGCAA CCGCTGCAAT GGCTGGTGTC CGGTGATGTT GTGATGGGGT CAGTCTATAA TGGCCGTGTG GGGTCCGCGC TAAAAGAAGG CCATGATTTT AGAATGGTTT GGACTGACAG TATCTACGAT ATGGACAGTT GGACTATCGT CAAAGGCTCC AAAAAAAAAG TATTGGCAGA ACAATTTATC GCCTTTGCCA ACTTAGCGGA AAATCAGAAA GTCTTTGCAG AAAATATCGC TTATGGCCCG ACCAATATCA ACGCCACCTT GATGATTGAT CCCGAAATCG CCGCTAATTT ACCCACTGCG CCAGCCAACC TGGCTGAGGC TTTTCCCATG AACAATCAAT TCTGGGTCGA GCATAGCGAA GATCTTGAGC AACGCTTCAA CTCTTGGGCA GCTAAATAA
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Protein sequence | MFKIITLTTL LAGWVFQTHA ETLTVVSFGG LNKDAQVKAF YKPFMAAGKG TIEAGEYNGE MARIRAMVET GQIGWDIVEV EGPELLRGCN EGLFETLDWS KLGDERQFIK GTVSQCGSGL FLWSMLLIYD ASKFKTPVTS WADFWNVTTF PGKRSLRKTA KFTMEIALLA DGVKREDVYR VLATPEGVER VFNKLDQLKP NIQWWESGAQ PLQWLVSGDV VMGSVYNGRV GSALKEGHDF RMVWTDSIYD MDSWTIVKGS KKKVLAEQFI AFANLAENQK VFAENIAYGP TNINATLMID PEIAANLPTA PANLAEAFPM NNQFWVEHSE DLEQRFNSWA AK
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