Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1324 |
Symbol | |
ID | 6088785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1453270 |
End bp | 1454160 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641596388 |
Product | lipid kinase |
Protein accession | YP_001720071 |
Protein GI | 170023566 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACACA CTCTTTTGAT CCTCAACGGC AAAGAATCAG GCAACCCTGA GGTCCGCGAA GCGGTCAAAA ACGTACGCGA CGAAGGCTTA ACGCTTCATG TCCGTATCAC CTGGGAGCAC GGTGATGCAA AACGCTATGT TGAAGAGGCC GCCACCTTGG CTGTCAGTAC CGTTATCGCT GGAGGCGGCG ATGGCACCAT TAATGAAGTG GCAACAGCAT TGATGAGTTT ACCTGCGGAT AAACGCCCTT GTCTGGGGAT CCTACCGCTG GGAACCGCCA ATGATTTTGC GACTGGCTGC AATATCCCTT TGCAAATAGA GAACGCACTG CAACTGGCGG TCAAAGGCCG GGCGGTGGCA ATCGATCTGG CTCAAGTCAA CGGTGAGCAT TACTTTATCA ATATGGCAAC CGGGGGTTTT GGTACCCGAA TTACCACCGA AACACCCGAT AAACTCAAAG CGGCCTTGGG CGGAGTCTCT TACTTTATTC ATGGGCTGAT GCGCCTTGAT GCCCTAAAAG CAGACAGTTG CAAAATCCAT GGCCCTGACT TTCATTGGTC GGGGGATGCG CTGGTCATTG GCATCGGCAA CGGTAAACAG GCCGGGGGCG GACAACTTCT TTGCCCCGAT GCACTGATTA ATGACGGCCT GATGCAATTA CGCCTACTGA CAGCAAAGGA GTTACTCCCT GCAGTGCTGA GTACCCTGTT CAATGGTGAG AAAAATAAGA ATGTTATCGA CGCCACGGTA CCTTGGCTCG ATATCACTGC ACCGAACGAT ATCACCTTCA ATCTGGATGG TGAGCCACTG TCCGGCAGAC ATTTCCACAT TGAAATCTTA CCCCATGCGA TTCAGTGCCG GCTACCACCG AATTGCCCGT TGTTAGGCTA A
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Protein sequence | MPHTLLILNG KESGNPEVRE AVKNVRDEGL TLHVRITWEH GDAKRYVEEA ATLAVSTVIA GGGDGTINEV ATALMSLPAD KRPCLGILPL GTANDFATGC NIPLQIENAL QLAVKGRAVA IDLAQVNGEH YFINMATGGF GTRITTETPD KLKAALGGVS YFIHGLMRLD ALKADSCKIH GPDFHWSGDA LVIGIGNGKQ AGGGQLLCPD ALINDGLMQL RLLTAKELLP AVLSTLFNGE KNKNVIDATV PWLDITAPND ITFNLDGEPL SGRHFHIEIL PHAIQCRLPP NCPLLG
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