Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1276 |
Symbol | |
ID | 6089650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1403716 |
End bp | 1404945 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596344 |
Product | cysteine desulfurase |
Protein accession | YP_001720027 |
Protein GI | 170023522 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00157162 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAT CAAAAGTAAA GACACCGATC TATCTGGATT ATGCAGCAAC GACGCCAGTA GATCCGCGTG TCGCTGAAAA AATGATGCAG TATCTCACTC TGGACGGTAT CTTCGGTAAC CCAGCCTCAC GTTCGCATAA GTTTGGTTGG CAGGCAGAAG AAGCTGTTGA TATTGCACGT AATGACGTCG CCGCATTGGT GGGTGCAGAC CCTCGTGAGA TCGTCTTCAC CTCCGGTGCG ACCGAGTCTG ATAACCTCGC TATTAAAGGT GCTGCTAATT TCTATCAGAA GAAAGGCAAG CACATCATCA CTTGTAAAAC CGAACATAAA GCGGTGTTGG ATAGCTGTCG CCAATTGGAG CGTGAAGGCT TCGAAGTGAC TTATCTGGCA CCGCAGCCTA ACGGTATTAT CGATCTGAAA CAGCTTGAAG CGACAATGCG TGAAGACACC ATTTTGGTTT CTATCATGCA TGTGAATAAT GAGATCGGTG TGGTACAGGA TATCGCTGAA ATCGGCGAAA TGTGCCGTAG TCGCGGGATC ATTTTCCACG TTGATGCTAC ACAAAGCGTC GGTAAATTAC CTGTTGATCT GAGTAAACTG AAAGTCGATT TGATGTCCTT CTCTGCCCAT AAAGTTTATG GCCCGATGGG CATTGGCGCA CTGTTTGTTC GCCGTAAACC CCGTATTCGT ATTGAAGCAC AGCAGCACGG CGGTGGTCAT GAGCGCGGTA TGCGTTCAGG CACCTTGCCT GTGCACCAAA TCGTTGGGAT GGGTGAAGCT TACCGCATTG CCAAAGAAGA GATGGAAAGC GAAGCTGCAC GTCTGCGTTC ACTGCGTTTG CGTTTGTGGA ACGGCATCAA AGATATCGAA GAAGTTTACC TGAACGGCTC ATTAGAGAAT GGCGCTCCTG GCATTCTGAA CGTCAGCTTC AACTATGTTG AAGGTGAGTC GTTGATCATG GCACTGAAAG ATTTGGCTGT CTCATCAGGT TCAGCCTGTA CCTCTGCGAG TTTGGAGCCT TCTTACGTGT TGCGTGCGTT GGGGATGAAC GACGAACTGG CTCACAGTTC AATTCGTTTC TCTCTGGGGC GTTTCACCAC AGAAGAAGAG ATCGACTACG CCATTGCGCT GGTACATAAA TCCATTGGTC GTCTGCGTGA TTTATCCCCA TTGTGGGATA TGTTCAAGCA GGGCGTGGAT ATCAGCAGCA TTGAATGGTC CCATCATTAA
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Protein sequence | MTESKVKTPI YLDYAATTPV DPRVAEKMMQ YLTLDGIFGN PASRSHKFGW QAEEAVDIAR NDVAALVGAD PREIVFTSGA TESDNLAIKG AANFYQKKGK HIITCKTEHK AVLDSCRQLE REGFEVTYLA PQPNGIIDLK QLEATMREDT ILVSIMHVNN EIGVVQDIAE IGEMCRSRGI IFHVDATQSV GKLPVDLSKL KVDLMSFSAH KVYGPMGIGA LFVRRKPRIR IEAQQHGGGH ERGMRSGTLP VHQIVGMGEA YRIAKEEMES EAARLRSLRL RLWNGIKDIE EVYLNGSLEN GAPGILNVSF NYVEGESLIM ALKDLAVSSG SACTSASLEP SYVLRALGMN DELAHSSIRF SLGRFTTEEE IDYAIALVHK SIGRLRDLSP LWDMFKQGVD ISSIEWSHH
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