| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1272 |
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| Symbol | |
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| ID | 6088344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1400196 |
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| End bp | 1401218 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641596340 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001720023 |
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| Protein GI | 170023518 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000384765 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGTAG TTATTGCTCC GATTCCACGG CCCAAACAGC GACATTGGCT GATCAATTTA
TGGCCTCTAT TGTTGTTCTT ACTCATATTG GCTAGCGCTG GGTATGTCTC CTGGCTTTAT
TGGCCAGAAT TGCTGTTTAA AACAGTAGCC TGGCAAAAAA GTGTGCATCA GCAAATGGCC
CAACTGTTGC AGCAAGTTAA AGCCGAACCG CATCAGGCGG GGTGGGTGCT GATGTTGTTT
AGCCTGATTT ATGGCGTGTT ACATGCTGTA GGGCCGGGCC ACGGTAAAGT GGTGATTGTG
ACGTATCTGG CAACCCACCC GGCGCGGTTA AAAAGCAGCC TGAAACTGAC TTTTGCCGCT
TCAATATTGC AAGGTAGCGT AGCGATTCTA CTGGTAACTT TGTTACTTGG GGTATGGCAG
CTCTCTTCAC GGTATCTGCA TCAAAGCAGT TTTTGGCTAG AAAAAGGCAG TTTTCTATTG
GTTATTGGGT TGGGGATGTT GCTCTGTTTC CGGGCGGTAA AGCGGATCTA TCGACAAATT
AACGCCTTAA AACCACAGAA AATGACTTTT CAGCAGATTC AGCCATTACC GGCTAACCAT
GTGCACAGCG ACAACTGCGG CTGTGGGCAC CGTCATCTGC CCAGTGATAA AGAGCTACAA
GCCGGTGGCG ATTGGCGCAC CCGTTTGACG ATTGTATTGG CGATGGGGAT GCGCCCTTGC
TCCGGTGCGA TTATGGTGTT GCTGTTTTCC AAGGTGATTG GCGTTTACTG GTGGGGGATT
TTGTCGGCGA TGGCGATGGC TTTAGGGACG TCGCTGACTA TCTCGCTGTT GGCACTGTTC
GTCCATTATG CACGGCGCTT GGCGGTATAT TTAAGCCGTA AACGCGCCCC TGCCGCTTGG
GGAGAGATTG CCTGGGCCAC GCTGGCATTA ACCGGGGGAA TTATTCTGCT GTTCGCGGGG
GTTCTGTTTT ATTTGTCCAG TCAGCCGGAG ATGGTTGGGG CTGTTCGTCC ATTTGGTCGC
TGA
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| Protein sequence | MSVVIAPIPR PKQRHWLINL WPLLLFLLIL ASAGYVSWLY WPELLFKTVA WQKSVHQQMA
QLLQQVKAEP HQAGWVLMLF SLIYGVLHAV GPGHGKVVIV TYLATHPARL KSSLKLTFAA
SILQGSVAIL LVTLLLGVWQ LSSRYLHQSS FWLEKGSFLL VIGLGMLLCF RAVKRIYRQI
NALKPQKMTF QQIQPLPANH VHSDNCGCGH RHLPSDKELQ AGGDWRTRLT IVLAMGMRPC
SGAIMVLLFS KVIGVYWWGI LSAMAMALGT SLTISLLALF VHYARRLAVY LSRKRAPAAW
GEIAWATLAL TGGIILLFAG VLFYLSSQPE MVGAVRPFGR
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