| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1268 |
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| Symbol | |
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| ID | 6088340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1395821 |
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| End bp | 1396360 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641596336 |
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| Product | virulence-related outer membrane protein |
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| Protein accession | YP_001720019 |
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| Protein GI | 170023514 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000113528 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGA CATTACTGGT CTCTTCTTTA ATTGCATGTT TATCAATTGC GTCTGTTAAT
GTGTATGCCG AAGGCGAAAG CAGTATTTCT ATTGGATATG CTCAAAGTCG TGTCAAGGAC
GATGGGTACA AGTTGGATAA AAATCCAAGA GGTTTCAACC TGAAGTATCG TTATGAATTC
AATAATGACT GGGGAGTGAT AGGTTCATTT GCTCAGACTC GCCGGGGGTT CGAGGAATCT
GTTGACGGAT TCAAACTTAT TGATGGTGAT TTTAAGTACT ACTCAGTGAC TGCGGGGCCT
GTTTTCCGCA TTAACGAGTA TGTTAGCTTG TATGGATTAT TGGGGGCAGG TCATGGAAAG
GCTAAAGTTT CCTCAATATT TGGTCAATCA GAGAGTAGAA GTAAAACATC TCTGGCATAC
GGTGCCGGAT TACAATTTAA TCCACATCCA AATTTTGTCA TTGATGCTTC ATATGAATAC
TCCAAACTCG ATGATGTGAA AGTGGGTACT TGGATGCTTG GCGCGGGTTA CCGGTTCTAA
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| Protein sequence | MNKTLLVSSL IACLSIASVN VYAEGESSIS IGYAQSRVKD DGYKLDKNPR GFNLKYRYEF
NNDWGVIGSF AQTRRGFEES VDGFKLIDGD FKYYSVTAGP VFRINEYVSL YGLLGAGHGK
AKVSSIFGQS ESRSKTSLAY GAGLQFNPHP NFVIDASYEY SKLDDVKVGT WMLGAGYRF
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