Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1212 |
Symbol | |
ID | 6089670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1342566 |
End bp | 1344743 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641596280 |
Product | virulence-associated E family protein |
Protein accession | YP_001719963 |
Protein GI | 170023458 |
COG category | [R] General function prediction only |
COG ID | [COG5545] Predicted P-loop ATPase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTC GCTATTCAAC GGGGCGACAC GCCAAAGATA ACAAGCCCAC CCCAAAAGTG TGCGAGAGCT TTACGGCTTT CGCGTCAGCG GTAGTAGGGG GCAGCAAAAC TATTGGCGTT TTGTCTACCG ATACAAAAGA AATCCTTAAC CAGAAGAAAA CGCGTCTGCC TTATTTTTGG GTGGAAATGC TTGATCCCGC CGGGGGGCGT AACAAAGCTA ACGCTGGCGC TAGCCACGTT GTCCGTTTTG ATATCGACGG GACTACAGCG GCTGGGTGGG AGATCCTGCG GGAACTGTTC AGCACTTATC AGGGCTTTGC CTATACCACC GCCAGTCACA TGCACCCCAC GGTAAACAGT GAGCAACGCT GGCGTGTTGT ACTGGCGGTG TCCCGTCCTT TATCTCCTGT AGAGCTTTTG TGTCTGAGCA CGACTGTTCA GCAGGATGTT ATGGATACTT ACGAGCTGAT AGCCGAAGAC TCCGTGAATT GGGATAGTCG TGTCTACAAC GCCGCTCAAG TATTGTTTGG CCCTGACGAG CGCGCCGAAG TTGTCTATTT TTCTGGTGAT GCTGTTGACG CCGATAGTGT ATTGCTTCGC GCAGTACCCG CCGAGGTCCC CCCCTCAATC CTACGAGACC CGAGTAAAGT CAGCGCTGTA GGTACGGATG ATAAAGCCGA GTATCTCATT GCTAATGGCC ATGCAAAGGG TGAGTTGATA GACGGTATTA AGCTGCCGAT CATCTGCCCC TTTGAAGATG GTCACACCTC GGCAAGCGGT GAAACCTCAA CTGTCTACAT GTTGGACGGT ACCGGGGGGT TTGAGCAGGG CAAAATTATT TGTCTGCATG AAGGCTGTAA GCACCGTTCG CAAGAGGACT TCCTCGACAA GATCGGCTAT CGAGTTGCGG ACTTCGATAT CGTTGAAGCG GAGGGCGCTA GCGGGGAATA CCTTCCTTGG CCTAAGTTTA AACGTGATAA ATTTGACCAG ATTGAGGGCA CTATTACTAA TGTGCTGATG GCGCTACGGC GACCTGACCT CTGCGGTGTA CAGATCCGCC TTGATGAGTT TCGTAACGAT ATTATCCTGA CTACCCCCAA AGGTAGCCAC GTCCAACTAC GTGACGAGTA CTACACCAAG ATCCATACGA CCATAGAACA AAAATTGGGT TTCAAAAAGT TTGAGGAAGC CGCGATCAAA CGCGCTGTCA GGCTCATTGC TTTTGAGAAC CGCTATGACT CTCTTAAGGA CTGGATTAGT AAATTACCTG AATGGGACGG TACTCCGCGT ATCGACACCT TCTTTTGCAG ACATTGGCGT ATCGATCAGT CAGCGTATAC CAAGGCCGTT GGACGCTATT GGTGGACTTT GCTGGCGGGG AGGGCGTTAG AACCCGGCAT AAAAGGTGAT ATGGCGGTTG TTCTGGTCAG CCAGCAAGGT AAAAATAAGT CTGAGGGGAT CCGTTCTATG GCCCCGACGC CTGAGCATTA TATGGAACTC GATTTTGAGA AGCCCGCCGC CGAACGGATA AGAGAGATGC GCGGGCATAA CGTGATTGAA TTGGGTGAAA TGCGAGGTAT GAATAAAGCC GGTATAGGGG CTGTTCGTGT CACTATATCT ACCCGTGCAG ACCGCAATCG GGGTCTTTAC CGTGAACACT ACGACATCTT GCTTCGCCGT TGTGGTTTCA TCGCTACGGT AAATACCGAT ACGCCGTTGA CCGATTCCGA GGGTAACAGG CGTTGGTTAC CTATGACTAT CCCCGACGAT ACCGACGGTA AACATATCGC GAAACAGATA GAAGCAGAGC GTGACCAGCT TTGGGCGGAG GCAGTTCGCG TATTTAAGCA AGACGGCATT GCATGGGAAC GTGCTGAAAC GTTAGCCAAA ACGATACTAA GCGACTACGA AGTGAAAGAC GATGTTTGGG TATCCTGCAT TTCTGAATGG CTTGAGACCG AAGCCATAGA GCTTGGTGAT ACCTCAGGTA TTACCAATGG CCAGCGGGTG CCTTTGACGT CAAAAGACCT GTTAGTAGAA GCCATCGGCT TTAAAGCCCC TCAGGTCAAG CGAGGGGACG AAATGCGAGT TGCAAAGATT ATGAAGGATC TTGGCTACAA GAAGAAACGT TTACTTTCGT TACCCGGGCA ACCTTATCAC TGGGAAAAAC GCGATTAA
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Protein sequence | MEIRYSTGRH AKDNKPTPKV CESFTAFASA VVGGSKTIGV LSTDTKEILN QKKTRLPYFW VEMLDPAGGR NKANAGASHV VRFDIDGTTA AGWEILRELF STYQGFAYTT ASHMHPTVNS EQRWRVVLAV SRPLSPVELL CLSTTVQQDV MDTYELIAED SVNWDSRVYN AAQVLFGPDE RAEVVYFSGD AVDADSVLLR AVPAEVPPSI LRDPSKVSAV GTDDKAEYLI ANGHAKGELI DGIKLPIICP FEDGHTSASG ETSTVYMLDG TGGFEQGKII CLHEGCKHRS QEDFLDKIGY RVADFDIVEA EGASGEYLPW PKFKRDKFDQ IEGTITNVLM ALRRPDLCGV QIRLDEFRND IILTTPKGSH VQLRDEYYTK IHTTIEQKLG FKKFEEAAIK RAVRLIAFEN RYDSLKDWIS KLPEWDGTPR IDTFFCRHWR IDQSAYTKAV GRYWWTLLAG RALEPGIKGD MAVVLVSQQG KNKSEGIRSM APTPEHYMEL DFEKPAAERI REMRGHNVIE LGEMRGMNKA GIGAVRVTIS TRADRNRGLY REHYDILLRR CGFIATVNTD TPLTDSEGNR RWLPMTIPDD TDGKHIAKQI EAERDQLWAE AVRVFKQDGI AWERAETLAK TILSDYEVKD DVWVSCISEW LETEAIELGD TSGITNGQRV PLTSKDLLVE AIGFKAPQVK RGDEMRVAKI MKDLGYKKKR LLSLPGQPYH WEKRD
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