| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1089 |
|---|
| Symbol | |
|---|
| ID | 6088819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1228109 |
|---|
| End bp | 1228549 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641596155 |
|---|
| Product | peptidyl-tRNA hydrolase domain protein |
|---|
| Protein accession | YP_001719843 |
|---|
| Protein GI | 170023338 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.900586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC TACGGGCAAT AAGTGTGTTG ATTATCTCTA ATAGTGTCAC GCTAGCCAGC
GGCGAGATTG AGCTGACCGC GATCCGGGCG CAGGGCGCTG GAGGCCAGCA TGTTAATAAA
ACCTCAACTG CGATTCATTT GCGCTTTGAC ATTAAGGCCT CAAGCCTGCC AGAGTATTAT
AAAGAAAGGT TATTGTTGCT AAATAGCCAT TTGGTGACAG CTGAAGGTGT TGTCATCATA
AAAGCACAGG AATACCGCAG CCAAGATATG AACCGTGAGG CTGCATTGGC GCGCTTGGTA
GCACTCATTC GCCAGGCAAT GGTGGTAGAA AAGGCCCGTC GAGCGACAAA ACCAACCAAA
GGTTCAAAAA TCAGGCGAGT TGAGGGTAAA GTCCGCAAAG GGGCGACAAA AGCGCTGCGT
GGTAAAATAC ATCAAGAGTG A
|
|---|
| Protein sequence | MAKLRAISVL IISNSVTLAS GEIELTAIRA QGAGGQHVNK TSTAIHLRFD IKASSLPEYY
KERLLLLNSH LVTAEGVVII KAQEYRSQDM NREAALARLV ALIRQAMVVE KARRATKPTK
GSKIRRVEGK VRKGATKALR GKIHQE
|
|---|
| |