Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1071 |
Symbol | |
ID | 6089712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1209106 |
End bp | 1209864 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641596137 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_001719825 |
Protein GI | 170023320 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00176842 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCCTG TAAAAGAAGA TAGGGCTAAC TTGTCCCCCC GGAGTCCACG TCATGTTGCT ATCATTATGG ATGGTAATGG ACGTTGGGCT AAAAATAAGG GTAAATTAAG AGTTTTCGGC CATAAAGCCG GGGTGAAGTC CGTTCGACGC GCAGTGAGTT TTGCTGCGAA GCATAATTTA GATGCGCTCA CTCTTTATGC TTTTAGCAGT GAAAACTGGA ATCGCCCTGA CCAAGAAGTG ACCGCTCTGA TGGAGCTTTT TGTTCGAGCA CTAGACAGTG AAGTAAAAAG CTTGCATAAA CATAATGTTC GTTTATCTAT TATTGGTGAT ATCAGCCGTT TTAGTGGGCG TTTACAAGAG CGAATTCGTC GTTCAGAAAA ATTAACGGCA AATAATGACG GATTGAAACT CAACATTGCT GCCAATTATG GTGGCCGTTG GGATATCATC CAGGGGGTGC GCCATTTAGC TGAACAAGTT CAGAAAGGGG AATTGCAACC TACAGATATC AGTGAAGAGT CGCTCAACTC GTATATCTGC CTGCATGAGC AATCTCAGGT GGACTTAGTG ATCAGAACCG GTGGTGAACA TCGCATCAGT AATTTCTTGT TGTGGCAAAT AGCCTATGCT GAACTTTACT TTACAGATGT CCTCTGGCCT GATTTTGATG AAAATGTCTT TGAAGGTGCG CTGAATGCAT TTGCACAACG CGAGCGTCGC TTCGGGGGAA CTACACCTAT CGATGCCACT GCATCCTAG
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Protein sequence | MSPVKEDRAN LSPRSPRHVA IIMDGNGRWA KNKGKLRVFG HKAGVKSVRR AVSFAAKHNL DALTLYAFSS ENWNRPDQEV TALMELFVRA LDSEVKSLHK HNVRLSIIGD ISRFSGRLQE RIRRSEKLTA NNDGLKLNIA ANYGGRWDII QGVRHLAEQV QKGELQPTDI SEESLNSYIC LHEQSQVDLV IRTGGEHRIS NFLLWQIAYA ELYFTDVLWP DFDENVFEGA LNAFAQRERR FGGTTPIDAT AS
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