| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1066 |
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| Symbol | rpsB |
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| ID | 6090548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1204135 |
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| End bp | 1204860 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641596132 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001719820 |
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| Protein GI | 170023315 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00351639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTG TTTCCATGCG CGACATGCTC CAGGCTGGTG TTCACTTTGG TCACCAAACC
CGTTACTGGA ACCCGAAAAT GAAGCCTTTC ATCTTCGGCG CACGTAACAA AGTTCACATC
ATCAACCTGG AAAAAACTGT ACCAATGTTC AACGAAGCTC TGGCTGAGTT GACTAAAATT
TCTTCCCGTA AAGGTAAGAT CCTGTTTGTT GGTACTAAAC GCGCAGCAAG CGAAGCGGTA
AAAGAAGCTG CTAACAACTG CGACCAGTTC TTCGTGAACC ATCGCTGGTT GGGCGGGATG
CTGACTAACT GGAAAACTGT TCGTCAGTCC ATCAAACGTT TGAAAGATTT GGAAATCCAG
TCTCAAGACG GCACCTTTGA TAAGCTGACC AAAAAAGAAG CGCTGATGCG TACCCGTGAA
CTGAACAAGC TGGAAAACAG CCTGGGTGGT ATCAAAGACA TGGGCGGCTT ACCAGACGCA
CTGTTTGTTG TTGATGCTGA TCACGAACAC ATCGCTATCA AAGAAGCTAA TAACCTGGGT
ATCCCGGTAT TCTCTATCGT TGATACTAAC TCCGATCCAG ATGGCGTTGA CTTCATCATC
CCTGGTAACG ATGACGCAAT CCGTGCAGTT AAACTGTACC TAGGCGCTGT TGCTACCGCC
GTCCGTGAAG GTCGTTCTCA AGATCTGGCC GTTCAGGCGG AAGAAAGCTT CGTAGAAGCT
GAATAA
|
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| Protein sequence | MATVSMRDML QAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NEALAELTKI
SSRKGKILFV GTKRAASEAV KEAANNCDQF FVNHRWLGGM LTNWKTVRQS IKRLKDLEIQ
SQDGTFDKLT KKEALMRTRE LNKLENSLGG IKDMGGLPDA LFVVDADHEH IAIKEANNLG
IPVFSIVDTN SDPDGVDFII PGNDDAIRAV KLYLGAVATA VREGRSQDLA VQAEESFVEA
E
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