Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1052 |
Symbol | |
ID | 6090246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1189388 |
End bp | 1190305 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596118 |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | YP_001719806 |
Protein GI | 170023301 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAC GATTACCACC CCTGAATGCC TTACGGGCTT TTGATGCCGC CGCCCGTCAC CTCAGTTTCA CTAAAGCAGC CGAGGAGTTA TTTGTCACTC AAGCCGCTGT TAGCCACCAG ATCAAATCGC TGGAGGATTT TCTCGGGCTG AAATTGTTCC GCCGACGTAA TCGCTCTTTG TTGTTGACCG AAGAAGGGCA GAGCTATTAC CTCGATATCA AAGAGATTTT CACGTCTATT AATGAAGCGA CTCGTAAGTT GCAAGCGCGC AGTGCGAAGG GAGCGTTAAC CGTCAGTTTG CCGCCCAGTT TTGCCATTCA ATGGCTAGTT CCTCGTTTGT CTGGGTTTAA TGCGGCTTAT CCAGGCATTG ATGTGAGGAT CCAAGCGGTG GATCGGGAAG AGGATAAGCT CGCTGATGAT GTGGATGTCG CGATATTCTA CGGCCGCGGT AATTGGAGTG GGTTGCGTAC AGAGCGCTTG TATGCTGAAT TCCTATTACC CGTCTGTGCA CCTAGCTTAC TAACTGGTGA GAATGGATTA AAAGTACCAT CAGATCTGGC TAATCACACC TTGTTGCATG ATACTTCACG CCGTGACTGG TTAGCGTATA CCCGCCAACT GGGGGTACCG CAGATTAATG TGCAGCAAGG CCCGATATTT AGCCACAGTG CCATGGTGGT TCAGGCTGCG GTTCATGGTC AAGGGATTGC TCTGGTGAAT AATGTCATGG CCCAGTCTGA GATTGAAGCG GGCCGATTGG TTTGCCCGTT TAACGATGTA TTGGTGAGTA AGAATGCTTT TTATTTGGTT TGTCATGACA GTCAGGCAGA ACTGGGTAAA ATAGCCGCCT TCCGTCAGTG GATACTGGCA AGAGCTGCCA GCGAGCAGGA GAAATTACGT TTTCGTTATG AAAACTGA
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Protein sequence | MSKRLPPLNA LRAFDAAARH LSFTKAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL LLTEEGQSYY LDIKEIFTSI NEATRKLQAR SAKGALTVSL PPSFAIQWLV PRLSGFNAAY PGIDVRIQAV DREEDKLADD VDVAIFYGRG NWSGLRTERL YAEFLLPVCA PSLLTGENGL KVPSDLANHT LLHDTSRRDW LAYTRQLGVP QINVQQGPIF SHSAMVVQAA VHGQGIALVN NVMAQSEIEA GRLVCPFNDV LVSKNAFYLV CHDSQAELGK IAAFRQWILA RAASEQEKLR FRYEN
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