Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0992 |
Symbol | |
ID | 6088672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1113505 |
End bp | 1114002 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641596055 |
Product | PTS system mannose/fructose/sorbose family IIB subunit |
Protein accession | YP_001719746 |
Protein GI | 170023241 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
TIGRFAM ID | [TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.529927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCGGC CAAATATCGT CTGGACTCGT ATTGATGAGC GTTTACTTCA TGGACAGATC CGCATTACCT GGGGAAAGCA CACCGAAGCC AATTTAATTC TGGTGGCCAA TGATGACGCT GCCGATGGCC CAAACTCGGC TTTCATGCAG GCGGGAATGA AAGCCTCCGC TGGCGGTGAA TATGCAGTGC GCTTTTTCAG TATCCAGAAA ACAATTGATG TCATCCATAA AGCCTCTCCT CAGCAGAAGG TTTTCATTCT GTGTAACTCC CCGACGGATG TTGCGCGTTT GGTCGAAGGC GGTGTGCCAA TTACTCAGTG CAACGTGGGC AATATGCACT ACCACGACGG TAAACGTCAG ATTGCCAAAA CAGTCTCTGT GGATGAAAAA GATCTGGACG CTTTCCAACG TATGGCCGCG CTTGGCGTGG CCTGTACGGT GCAGAACACA CCAGACCAAA CGCCAATCAA TGTGATTGAG CTGGCCGCCA GGGCATAA
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Protein sequence | MTRPNIVWTR IDERLLHGQI RITWGKHTEA NLILVANDDA ADGPNSAFMQ AGMKASAGGE YAVRFFSIQK TIDVIHKASP QQKVFILCNS PTDVARLVEG GVPITQCNVG NMHYHDGKRQ IAKTVSVDEK DLDAFQRMAA LGVACTVQNT PDQTPINVIE LAARA
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