Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0978 |
Symbol | |
ID | 6090286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1098735 |
End bp | 1100042 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596041 |
Product | major facilitator transporter |
Protein accession | YP_001719732 |
Protein GI | 170023227 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTG ATATTAATCA ATCAGCTAAA GTTGTAGGAC GGCGGAAAAT AAAGTCATTA CGTTGGTGGA TGCTGGCCTT ATTTTTACTT GGGGTCACCG TTAACTATAT AACCCGTAAT TCTCTAGGGA TTTTAGCCCC TGAGTTAAAA ACCAGTCTGA ATATGACTAC CGAGCAATAC TCATGGATTG TAGCCTCTTT CCAACTGGCT TATACCGTGT TCCAACCACT TTGTGGCTGG TTGATCGATG TCATCGGTTT AAAAATGGGG TTCCTGGTTT GCGCCAGTGT CTGGGCGGTG GTGTGCATGA TGCATGCCGG AGCGGGTACC TGGTTCCAAC TGGCAGTATT ACGCTTCTTT ATGGGCAGTG CCGAAGCCGC AGCCACCCCC GCAAACGCCA AAGCCATTTC GGATTGGTTC CCGAAAAAAG AACGGCCCAT TGCCGCTGGA TGGGCTGGGG TGGGGTTCTC TATCGGTGCG ATGTTGGCCC CCCCGATTAT CGTACTGGCG CATGTGGCAC TCGGTTGGCA AGGGGCATTC TTGTTCTCCG GTGCATTAGC CATGATTTGG GTTCTGCTGT GGTGGCGTTT TTACCATTCA CCGGATACTC ATCCAAATCT GAGTCAAGAA GAGTTTGAAC TGATTCACCA AGATAATGAA CCCGTACTAC CACGACTGCC ATTCCTTAAA TCCTTAGCCA TTCTAAGTAA AAATAAGAAA TTTTACGGTA TTGCTATTCC CGCGTTTCTG GCGGAACCGG CCTGGGCTGT ATTTAGTTTC TGGGTACCGC TGTATTTAGC CACCGAACGC GGCATGGACC TGAAACAGAT CGCCATGTTC GCCTGGCTGC CATTCCTGGC GGCAGATATT GGCAGTGTCG CCAGTGGCTA TTTAACCAAA CTCTATCAGA AATGGTTTGG TTGCAGCCGG GTCAACTCGG TGGTTGCCAG TTCGGTAACC GGTGCTTTTA TGATGGTGTC ATTGGCCTTT GTTGCCGTCA CCAAAGACCC TTATCTGGCA ATCGCTTTAA TCTCCATTGG CGGCTTTGGG CACCAAGTCA TCTCCTGCAT GCTCAGTGCA TTAGTGGTTG ACTCTTTTGA TAAAAATCAG GTTGCTACCG TCAATGGCCT GCGTGGTTCT TCCGCCTGGA TCGCCAGCTT CCTGTTTACA TTATTAATCG GGGCCGTTTC AGACACTATC GGCTTTAACC CGCTGTTTAT CGCTATGGGG TTCTTCGATC TGATTGGGGC CGTATTCCTG ATTGCTCTTT TCGCTGAGCG CCGTAATAAA CCCCAACCGA CGGTCTGA
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Protein sequence | MSIDINQSAK VVGRRKIKSL RWWMLALFLL GVTVNYITRN SLGILAPELK TSLNMTTEQY SWIVASFQLA YTVFQPLCGW LIDVIGLKMG FLVCASVWAV VCMMHAGAGT WFQLAVLRFF MGSAEAAATP ANAKAISDWF PKKERPIAAG WAGVGFSIGA MLAPPIIVLA HVALGWQGAF LFSGALAMIW VLLWWRFYHS PDTHPNLSQE EFELIHQDNE PVLPRLPFLK SLAILSKNKK FYGIAIPAFL AEPAWAVFSF WVPLYLATER GMDLKQIAMF AWLPFLAADI GSVASGYLTK LYQKWFGCSR VNSVVASSVT GAFMMVSLAF VAVTKDPYLA IALISIGGFG HQVISCMLSA LVVDSFDKNQ VATVNGLRGS SAWIASFLFT LLIGAVSDTI GFNPLFIAMG FFDLIGAVFL IALFAERRNK PQPTV
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