Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0854 |
Symbol | |
ID | 6090921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 977349 |
End bp | 978218 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641595916 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001719608 |
Protein GI | 170023103 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.11552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAC TAAACGTAGT TGAAGGGATC AATAATGCAA GCACCTGGTT GGCGAATAAC CAGGACTTAC TGATCCAATA CGCAGTCAAT ATTATTGCCG CGTTATTGAT CCTGATTGTC GGTTCGATCA TCGCTAAAGT GCTATCTGGC ATGCTCAATC GGGTGATGAG ATTGCGTGGC ATTGATGTCA CCGTTGCCGA CTTCTTATCA GCGATGGTGC GTTACAGCAT TCTGGCTTTC ACCATTGTGG CGGTACTGGG GCGGCTGGGT GTACAAACCG CATCGGTCAT TGCGGTCATT GGTGCTGCGG GTTTGGCCGT TGGTTTAGCC CTACAAGGGT CGCTGTCTAA CTTTGCTGCT GGTGTGTTGC TGGTCGCCTT CCGTCCGTTT AAAGCGGGTG AGTACGTCGA TCTGGGCGGT GTGGCCGGGA CGGTGGTGCA GGTGCAGATT TTCTCAACCA CCCTACGTAC GGTTGATGAC AAAATCATTG TGGTACCAAA TGGCAAAATT ATTGCCAACA ATATTATTAA TACCAGCCGC GAGCCGAACC GCCGTACCGA CATGATTGTC GGTGTGGCAT ATGATGCCGA TATTGATGTG GTGAAAAAGG TTCTTGGTGA CATCATCGCA GCTGATAGTC GGATCATACA CGAGAAAGGG GTGACGGTGC GCTTGAATGA AATGGCACCG TCCTCACTGA ATTTTGCTGT TCGTGTTTGG ACGACCAATG GTGATGCGCA AGAGGTGTTT TGGGACTTGA CTGAAAACTT CAAGCGGGCG CTGGATGCGC ACAAAATTGG TATCCCTTAC CCACAAATGG ATGTGCATTT GCATCAGGTG GCAAAAGCCG AAGCCGAGAA GCCGGAGTAA
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Protein sequence | MEELNVVEGI NNASTWLANN QDLLIQYAVN IIAALLILIV GSIIAKVLSG MLNRVMRLRG IDVTVADFLS AMVRYSILAF TIVAVLGRLG VQTASVIAVI GAAGLAVGLA LQGSLSNFAA GVLLVAFRPF KAGEYVDLGG VAGTVVQVQI FSTTLRTVDD KIIVVPNGKI IANNIINTSR EPNRRTDMIV GVAYDADIDV VKKVLGDIIA ADSRIIHEKG VTVRLNEMAP SSLNFAVRVW TTNGDAQEVF WDLTENFKRA LDAHKIGIPY PQMDVHLHQV AKAEAEKPE
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