| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0829 |
|---|
| Symbol | |
|---|
| ID | 6089555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 953200 |
|---|
| End bp | 953754 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641595891 |
|---|
| Product | protein of unknown function YGGT |
|---|
| Protein accession | YP_001719583 |
|---|
| Protein GI | 170023078 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0762] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACGC TGACTTTTCT GGCAAAAACG GTCATTGACC TATATGTGAT GGTACTGTTG
TTGCGCATCT GGATGCAGTG GGTTCACAGT GATTTCTATA ATCCATTGTC TCAATTTGTG
GTGAAAATAA CCCAACCTAT TGTTGGCCCA CTGCGCCGAG TGGTCCCCTC TCTGGGGCCA
ATCGATAGCG CATCATTGCT GTTGGCATAT TTATTGGTGG CCATTAAGTA CCCACTCCTC
TCACTGATTG GTCAAGGCTT CTTGTCACTC AGCATTGATC ACCTCTTTTT CGGCCTTATT
GGGCTGGTAA AAGCAGTGGG TCACCTGATT TTCTGGGTCA TGATTATCCG CGCACTGATG
AGTTGGATCA GTCAGGGCCG TAGCCCGGTA GACTACCTGC TGTTGCAGTT AACTGAACCA
TTAATGGCAC CGATTCGTCG TATTTTACCT GCGATGGGGG GGATCGATTT CTCGGCAATG
GTTGTCATTT TTATCTTGTA CCTGCTCAAC TCTTTAGCCA TGGAAACATT TGGGGCTATG
TGGCTTTCGC TGTGA
|
|---|
| Protein sequence | MLTLTFLAKT VIDLYVMVLL LRIWMQWVHS DFYNPLSQFV VKITQPIVGP LRRVVPSLGP
IDSASLLLAY LLVAIKYPLL SLIGQGFLSL SIDHLFFGLI GLVKAVGHLI FWVMIIRALM
SWISQGRSPV DYLLLQLTEP LMAPIRRILP AMGGIDFSAM VVIFILYLLN SLAMETFGAM
WLSL
|
|---|
| |