Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0826 |
Symbol | |
ID | 6087111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 951097 |
End bp | 952227 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641595888 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001719580 |
Protein GI | 170023075 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAT TACCCCCGCT CAGTCTCTAC ATCCATATCC CTTGGTGCGT CCAGAAATGC CCTTATTGTG ATTTCAACTC ACATGCGTTG AAAGGCGATG TCCCTCATCA GGAATATGTA GAGCACGTAC TGGCGGATTT GGATGCTGAC GTGCCTCTGG TGAGTGGCCG TGAAATCAGC ACAATTTTTA TTGGTGGCGG CACACCCAGC TTGCTGAGTG CAGAGGCCAT GCAGCAACTA CTTGATGGTG TTCGCGCGCG TTTGCCGGTT GCCAGTGACG CAGAGATCAC CATGGAAGCC AACCCCGGAG CGGTCGAAGC CGATCGCTTT AGCGGCTATC AGCGAGCGGG TATTAACCGC ATATCCATTG GCGTCCAGAG CTTTAGCGCA CAGAAATTAA CGCGGCTGGG GCGGATACAT GGGCCAGATG AAGCAAGGCG GGCAGCAGAG CTGGCAACCT CACTGCAATT ACGTAGCTTT AATCTGGATT TGATGCACGG TCTGCCTGAT CAAACACTGG AAGAAGCATT GGATGATTTG CGTCAGGCTA TCGCCTTAAA TCCACCACAC TTATCTTGGT ATCAGCTGAC TATTGAGCCG AATACTGGCT TTAGTTCCCG GCCCCCAATC CTGCCCGATG ACGATGCGTT ATGGGATATT TTCCAGCAAG GTCATCAGCT ACTCAGTGCC GCTGGTTATC TGCAATATGA AACCTCGGCC TATGCCAAGC CAGGTTACCA ATGCCAGCAT AATCTTAACT ACTGGCGCTT TGGTGATTAT CTGGGGATTG GCTGTGGGGC GCATGGCAAG ATCACATTTA ACGATGGGCG TATTTTACGG ACCATAAAAA CCAAACATCC ACGTGGTTTT ATGCAGGGAA AATACTTGGA TAAACAATAT GAAGTGGCAG CAGTCGACCG GCCTTTTGAG TTCTTTATGA ACCGCTTCCG TTTGTTGGAA GCTGCCCCTC GGGCTGATTT CTATCACTTC ACCGGGTTAA CTGAGAGTAC TATTCGCCCA CAGTTAGATG AGGCAATAGC AAAAGAGTAT TTAATCGAAA CAACAGAATA CTGGCAGATT ACCGAAAAAG GAAAATTGTT CCTTAACTCG CTACTGGAGC TATTTTTATA G
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Protein sequence | MLKLPPLSLY IHIPWCVQKC PYCDFNSHAL KGDVPHQEYV EHVLADLDAD VPLVSGREIS TIFIGGGTPS LLSAEAMQQL LDGVRARLPV ASDAEITMEA NPGAVEADRF SGYQRAGINR ISIGVQSFSA QKLTRLGRIH GPDEARRAAE LATSLQLRSF NLDLMHGLPD QTLEEALDDL RQAIALNPPH LSWYQLTIEP NTGFSSRPPI LPDDDALWDI FQQGHQLLSA AGYLQYETSA YAKPGYQCQH NLNYWRFGDY LGIGCGAHGK ITFNDGRILR TIKTKHPRGF MQGKYLDKQY EVAAVDRPFE FFMNRFRLLE AAPRADFYHF TGLTESTIRP QLDEAIAKEY LIETTEYWQI TEKGKLFLNS LLELFL
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