| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0815 |
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| Symbol | |
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| ID | 6088444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 931351 |
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| End bp | 933495 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641595877 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001719569 |
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| Protein GI | 170023064 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.806497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TAAACATGTT CATGCTATCC ACGTTCATGC GATCCATGTT CATGCGATCT
ACGTTGATAC CCTCTACGTT CATACTGTCC ACACTACTGC TGCCGGCTGT CGTGTTGGCA
GAAGATACGA TAATCGTTGA GAGAAATAGA TCGCAAACTG ATAGCTATCA AGCGACCACC
AGCGTGACAG CCAATCGATC GCCAGCCAAC ATTATCGATA CCCCGCAAAA CGTGACTGTC
GTGACACATC CGGTGTTGGA AGATTATGAT GTGACCAATC TTGGCGAGGC GCTTTATTTT
GTCAGCGGGA TTACCCAATC CAACACGCTG GGTGGCACGC AAGATGCGCT GATTAAGCGC
GGTTTCGGCA ATAACCGTGA CGGCTCAATT CTGCACGATG GCATACGCTC AATTCAGGCA
CGTAACTTCA CGCCCACCAG CGAACGCGTC GAGGTGCTGA AAGGCCCCTC CTCCATGCTA
TACGGTATGA ATGAACCGGG TGGGCTGATC AATGTGATCA GCAAAAAGCC ACAACTCGAT
CCCCATGTGC ATTTGGAAGC CAACGCCAGT AGTTTCAAGG GTGGCGGTGG CCAACTTGAT
GTAACCGGCC CCTTGGGGGA ATCCGGCTTT GCCGGGAGGC TGATTATCGA TCATCAGGAG
ACCGATTACT GGCGTAACTT TGGCCGTAAC CGCCAGACTG TGGTCGCGCC ATCGCTTGAC
TGGTACGGTG AAAACACCAC CGTACACCTC GCTTGGGAAC GAATGGAGTA TTTGGTACCG
TTCGACCGTG GCACGGTGAT TGACCCACGC ACTGGCAAAC CCGTCGACAC GCCGCGTGAT
CGCCGTTTCG ACGAGAGCTA TAACGCCACC CGCGGCGATC AAGACACCGT CACGTTTAGC
ATCAACCACG ATCTGAACGA GTTCTGGTCC ACACAGCTAA ATTATGCTTT CAGCCGCAAT
AGCTATAGTG ATAATCAGGC GCGCGCCACT GCATTTAACG CTGAAACCGG CGTATTGACC
CGCCAGTCGG ATGCTACCGC TAACGCCAAG AGCCATTCGC AGGCGGTGCA GTGGGTAGTC
AATGGTGATC TCGATTGGGG TTTCACTCAT CACCAACTGA TGTTTGGTAT CGATTATGAA
GCCCGCCGCG TTTTCCGTGG CGACATGATA CGCGGCAGCA AAAACAACGG GTTTAATGTC
TATGACCCAA TTTATGGCAC TCTGCCCCCA TCCACAGCCG TCAGTGCTGC TGATAGCGAT
CAGCGGGAAA ATATCGATAG CCGCGCGCTG TTCATTCAAG ACTCGATGCG CCTAAACGAG
CACTGGCTAT TGCTCGGTGG CTTGCGCTAC GACAGCTTCG ATGTGATGGC CGGTAAAGGC
CGCCCATTCA AAAAGAATAC CGACAGTTCC GATAGCCGCT TGGTGCCGCG CGCCGGGGTG
GTTTACAACC TGAACGACTG GTCAAGCCTA TACGTCAGCT ACACCGAGTC CTTTAAACCG
AATGTCTCTA TCGCCACCGC CATTGATGCG TTACCCCCCG AATACGGTAA ATCGTGGGAG
GCGGGCTACA AAATTGATAT CAACAACCGT GTAACCGGTA CGCTCGCGGT CTACGATATC
CATAAACGTA ACATTATGGT CAGCGAGCTG GTAGACGGCG AAACAGTCAC ACGTACCGCC
GGTAAGGCGC GTTCACGCGG CCTGGAACTG GATATGGCTG GCAAAGTGAC CGACTCACTG
AGTCTCATTG GCAGCTATGC CTATACCGAT GCACGCCTGA CTGAAGACCC GGATAACAAT
GGTAACGACC TACCCAACGT GGCACGCCAC ACTGCGGCAC TGTTTCTGAG CCGGGACTTC
GGCAGTACGT CATTGATTTC AGGCGATGAA GTGAAAGCAG GTATTGGCGC ACGCTATGTC
GGGAAACGTG CTGGCGACGC CGCCAACAGT TTCTGGCTAG ATAACTACAC CGTAGCGGAC
GCGTTTGTCG CCTGGAAGAT GCCGCTCTCC GGCTATCAAC TCAAATGGCA GCTTAATGTG
AAAAACCTGT TCGATAAGAC GTACTATCCG TCGAGCGCTA ACAACCTGCG TATCGCTATC
GGCGAACCAC GTCAGGTTGT GTTGCAGGGC AGTATCGATT TCTAA
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| Protein sequence | MNKINMFMLS TFMRSMFMRS TLIPSTFILS TLLLPAVVLA EDTIIVERNR SQTDSYQATT
SVTANRSPAN IIDTPQNVTV VTHPVLEDYD VTNLGEALYF VSGITQSNTL GGTQDALIKR
GFGNNRDGSI LHDGIRSIQA RNFTPTSERV EVLKGPSSML YGMNEPGGLI NVISKKPQLD
PHVHLEANAS SFKGGGGQLD VTGPLGESGF AGRLIIDHQE TDYWRNFGRN RQTVVAPSLD
WYGENTTVHL AWERMEYLVP FDRGTVIDPR TGKPVDTPRD RRFDESYNAT RGDQDTVTFS
INHDLNEFWS TQLNYAFSRN SYSDNQARAT AFNAETGVLT RQSDATANAK SHSQAVQWVV
NGDLDWGFTH HQLMFGIDYE ARRVFRGDMI RGSKNNGFNV YDPIYGTLPP STAVSAADSD
QRENIDSRAL FIQDSMRLNE HWLLLGGLRY DSFDVMAGKG RPFKKNTDSS DSRLVPRAGV
VYNLNDWSSL YVSYTESFKP NVSIATAIDA LPPEYGKSWE AGYKIDINNR VTGTLAVYDI
HKRNIMVSEL VDGETVTRTA GKARSRGLEL DMAGKVTDSL SLIGSYAYTD ARLTEDPDNN
GNDLPNVARH TAALFLSRDF GSTSLISGDE VKAGIGARYV GKRAGDAANS FWLDNYTVAD
AFVAWKMPLS GYQLKWQLNV KNLFDKTYYP SSANNLRIAI GEPRQVVLQG SIDF
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