| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0804 |
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| Symbol | |
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| ID | 6087059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 913543 |
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| End bp | 916185 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641595865 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001719558 |
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| Protein GI | 170023053 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.493869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGC ATTCAGCACA CTTATTACGC CGCTTAAATC CCTATTGCGC ACAGGCACTG
GCCGGTGCTG CCACCCTGTG TCAGACCCGC GCCCATGCCG AGATCACTGT CGAACACTGG
TTGTTAAAAC TGCTGGAGCA GGGCGAAGGC GATATCACGG TGATTGCCCG GCGTTATGAG
TGGGACATGG ACAGCTTGTG GCAAGGGTTA CTGGCCTATC TGGATACTTT GCCGCGCACG
GTACAGGGTA AACCCCAACT GTCCGCCGCG TTGCAGCAAC TGATCAAAAG TGCCTGGCTG
GATGCCTCGT TGCAGGAAAA TGCTGATGCG GTGCGCTCGG TTCATCTAAT GGCAGCGCTG
ATAAATTCGC CATCATTATT GGCCGCCGAT GCCGCCTGGC CGTTGCTCAG CCTGAGCACT
ACCCAACTAC ACCGCTTGTT GCCGTTGCTG GACAGCCAAT CCGACGAACG CCCTGAAATA
CAGCAGGCCG CAGCACTGGC AGACAGCCCG GTCAATCTGA CCGATGAGGC CGCGACGGTT
ACCTCCGCCA GTGGTCAGCC GCAACTGAAT GACGCGCTGC AAGCGGCGCT GGATAAATTT
ACCCTCGATG TCACCGCCAA AGCCCGTGCC AACCAGATTG ATCCGATTTT TGGCCGCGAC
AGCGAAATCC GCCAGATGAT CGACATCCTG TCGCGCCGCC GTAAAAACAA CCCGATTTTG
GTGGGTGAAC CGGGTGTGGG TAAAACCGCG CTGGTTGAAG GGCTGGCACT GCGGATTGCC
GACGGCAACG TACCGGACAG CCTGAAAACC GTCAGTGTGC GCACACTGGA TTTGGGTCTG
TTACAGGCCG GTGCCGGGGT CAAAGGCGAG TTCGAACAGC GCCTGAAAAA TGTTATCGAG
GCGGTGCAAC AATCCCCCAG CCCGGTGCTG CTGTTTATCG ACGAAGCCCA CACCATTATC
GGGGCCGGTA ATCAGGCCGG TGGTGCCGAT GCGGCCAACC TGCTGAAACC GGCACTGGCG
CGTGGCGAAC TGCGCACCAT CGCCGCCACC ACCTGGTCCG AATACAAACA GTATTTTGAA
CGCGATGCCG CACTGGAGCG CCGCTTCCAG ATGGTCAAAG TGGACGAGCC GGATGATGAC
ACCGCCTGCC TGATGCTGCG TGGCCTGAAA GAGCGCTACG CCACCCATCA CGGCGTGCAT
ATTCTGGACG CCGCTATCAC CGCAGCGGTT ACCCTGTCGC GCCGCTTCCT GACCGGCCGC
CAACTGCCGG ACAAAGCGGT GGATCTGCTC GATACCGCCG GTGCCCGCGT GCGCATAAGC
ATTGACACCT TGCCGACTGC GCTGATGGCG ATTAACGCCG AACTGGCCGC ACTGGCGATG
GAGCAACAGG CCATCGAACA GGACTTGCTC CTGCTGCCGA ATGTCAGTTC AACGCGCTTA
CCTGAGATTG AGCAACGCCG CGCCGCGCTG GCGGTTGGGC AGCACACACT CGAACAGCAA
TATAAAGAAG AGAAACGGCT GACCACCCTG ATTATCGAGG CGCGTCAGGA CATCGCCAAC
GCGGCACATC TGGTCGCGTT GCAGGAGGAA TTCGTTCAGA TCCAAGGCAA TGCGCCGCTG
CTGTCGCTGG ACGTTGATGT GCGCACTGTT GCGGCTGTGA TCGCCGACTG GACCGGCGTG
CCGCTGGGCA GTTTACTCAA AGACGAACAA ACCAACTTGC TGTCACTGGA AAATCGTCTG
GGTGAGCGAG TGATTGGGCA GGATGCGGCA TTAGGTGCGC TGGCGCAACG GCTGCGGGCC
GCCAAAACCG GCCTGACATC AGAGAATGGC CCGCTGGGGG TGTTCCTGCT GGTCGGGCCG
AGTGGGATCG GCAAAACCGA AACCGCGCTG GCACTGGCCG ACAGCCTGTT CGGCGGCGAG
AAATCGCTGA TCACCATCAA CTTATCGGAG TATCAGGAAG CTCACACCGT CTCCCAGTTG
AAAGGGTCGC CCCCGGGCTA TGTCGGTTAC GGACAGGGCG GCGTATTGAC CGAAGCGGTG
CGCAAACGGC CTTACAGCGT GGTGCTGCTG GATGAAGTCG AGAAGGCCCA TCGTGATGTG
CTGAACCTGT TCTATCAGGT GTTTGACCGC GGTTTTATGC GCGACGGTGA AGGGCGCGAA
ATTGATTTCC GCAACACGGT CATTGTGATG ACCGCCAATC TGGGCAGTGA TCATCTGATG
CAGTTGCTGG ATGAGCAACC GGACGCGCCG GACAGCACCC TGCATGAACT GCTGCGGCCG
ATCCTACGCG ACCACTTCCA GCCCGCGCTG CTGGCCCGCT TCCAGACCTT GATTTACCGC
CCGCTTCAGG TGGATGCGCT CAAACGCATT GTGGCGATAA AACTGAATCA GGTGGCGCAA
CGCCTGCACT GTCACTACGG CCTGAGCTGC CAGATTGAAG ACAGCCTGAC CGACACACTG
GTCGCCGCCT GCCTGCTGCC GGACACCGGC GCACGCAACA TCGACAGCCT GCTCAATCAG
CAGATTTTAC CGGTATTGAG CCAGCAGCTG TTAAGCCGCA TGAGCGAGCA ACAGCGCACC
ACCTCGCTGA CGCTGGGCTG GCATGAAGAA GATGGCATCA CGCTGACATT TGAGGGCGAA
TAA
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| Protein sequence | MTTHSAHLLR RLNPYCAQAL AGAATLCQTR AHAEITVEHW LLKLLEQGEG DITVIARRYE
WDMDSLWQGL LAYLDTLPRT VQGKPQLSAA LQQLIKSAWL DASLQENADA VRSVHLMAAL
INSPSLLAAD AAWPLLSLST TQLHRLLPLL DSQSDERPEI QQAAALADSP VNLTDEAATV
TSASGQPQLN DALQAALDKF TLDVTAKARA NQIDPIFGRD SEIRQMIDIL SRRRKNNPIL
VGEPGVGKTA LVEGLALRIA DGNVPDSLKT VSVRTLDLGL LQAGAGVKGE FEQRLKNVIE
AVQQSPSPVL LFIDEAHTII GAGNQAGGAD AANLLKPALA RGELRTIAAT TWSEYKQYFE
RDAALERRFQ MVKVDEPDDD TACLMLRGLK ERYATHHGVH ILDAAITAAV TLSRRFLTGR
QLPDKAVDLL DTAGARVRIS IDTLPTALMA INAELAALAM EQQAIEQDLL LLPNVSSTRL
PEIEQRRAAL AVGQHTLEQQ YKEEKRLTTL IIEARQDIAN AAHLVALQEE FVQIQGNAPL
LSLDVDVRTV AAVIADWTGV PLGSLLKDEQ TNLLSLENRL GERVIGQDAA LGALAQRLRA
AKTGLTSENG PLGVFLLVGP SGIGKTETAL ALADSLFGGE KSLITINLSE YQEAHTVSQL
KGSPPGYVGY GQGGVLTEAV RKRPYSVVLL DEVEKAHRDV LNLFYQVFDR GFMRDGEGRE
IDFRNTVIVM TANLGSDHLM QLLDEQPDAP DSTLHELLRP ILRDHFQPAL LARFQTLIYR
PLQVDALKRI VAIKLNQVAQ RLHCHYGLSC QIEDSLTDTL VAACLLPDTG ARNIDSLLNQ
QILPVLSQQL LSRMSEQQRT TSLTLGWHEE DGITLTFEGE
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