Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0801 |
Symbol | |
ID | 6091039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 910238 |
End bp | 910924 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641595862 |
Product | hypothetical protein |
Protein accession | YP_001719555 |
Protein GI | 170023050 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCTC ACCTAACCGA ACACCCCCCA GTCGGGGATA TTGACGCCCT GTTACAGGAC ACCTGGCTAC AGGTGATCAG CCTGCGTCAA GGGGTAACCT GTGCCGAGGG CGAAGGGCTG GCATTCTGGC AGCGCTGTGT GGCGGACATT GAACGTGTCC ATCAGGCGCT GAAAGACGCC GGTCACAGCG AGCAGAGTTG CCAGCACATC CGATACGCCC AATGTGCACT GCTGGATGAG ACCGTGAAAG GGCGCGGTGT ACAGGATGAC GCCTACTTTG TGTGGTGTCA TTCGCCCTTA CAGGCGCATT TTTTCAATAC CCTGGATGCC GGTAGCCAGC TTTACGAGCG GATGCGCGCC GTGTTGCATG AGCCTGCGCC GGACAGCGCG GTACTGACCT GTTTTCACCG GGTATTGATG TTGGGCTTCC TCGGCGGGTA CGCCTCCCCG GCGGCTTCTG AACGGGAGCA ACTGATCGAT CAACTGAGCG TGCAGGTACC GGCGTTCAGT GTCGCGCCAT CCGGTGGGAT CCTGGCAAGC GCCGCCTCCC GCAACCGGTT GGGGATCTGG CTGCGTTACT GGCCGGTACG GCTCGGGCTG GCTGCGCTGA TGGTTGCGCT GTTGTGGTGG GGCCTTGATC ACTGGCTATC CGGTCTGTTA ACCACCTTAC TGCCGGAGCC GGTGTAA
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Protein sequence | MNPHLTEHPP VGDIDALLQD TWLQVISLRQ GVTCAEGEGL AFWQRCVADI ERVHQALKDA GHSEQSCQHI RYAQCALLDE TVKGRGVQDD AYFVWCHSPL QAHFFNTLDA GSQLYERMRA VLHEPAPDSA VLTCFHRVLM LGFLGGYASP AASEREQLID QLSVQVPAFS VAPSGGILAS AASRNRLGIW LRYWPVRLGL AALMVALLWW GLDHWLSGLL TTLLPEPV
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