Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0758 |
Symbol | |
ID | 6090136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 852783 |
End bp | 854540 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641595819 |
Product | ABC transporter related |
Protein accession | YP_001719512 |
Protein GI | 170023007 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.350541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGT TATCAGGTTT AAGCACGTTA ACCGGAGGCC GCTTAAAGGG CCTGAAAGGC ATGGTCAGTA TTGCCATCAT TGATGCTTTT CTGGCATCGC TACCCTATGC TTTTCTCTAT TATATTGTGT TGGATATGTT GTCCTCTCAC CCTGATGCCA TCTATCAACT TAAACTGACT GGATTTTGTG GGTTATTGAT GTTGGTCCGA GTGATATTAG CCAGAGTCCT GTACTTCCAT GTCGCAATTA TTGGGTTCAA TGCAGGGGCT AAAATTCGAA TACGTCTTGG TGAGCACCTA CGACGTTTGC CGATGGGTTT TTTCTACCGT TCGGATATGA GCAGTGTCAA TAATACGCTG CTAAAAGACA TTGATATGAT CGAAAATATT TTCACTCATC TCTATGCGCC CATTATTGCG ACCGCTTCGG TGCTCTGTTT CTTTTCCTTA GGACTCTTGC TAAAAGATTG GCGCATGGCG TTAGCCATGC TTTCAACGTT ACCCTTGGCG GTATGCGCAT ATATTTTGAC TCGTCGTTAT GCCCAGCGTT GGCAGGAATA TATGCAGCTA TTAATGTTTA AACTTAATGA TACATTGATG GAATACATTG ATGGCTTAAA AGAGTTAAAA GCTTACCGTA TGACAGGGGC CGCTTTTCAG CGGTTATCAC AGGTATTAAC CACCACCTAT CAACAATCAT TAACGGCAGA AAAAGCCGGT GTCTGGCCGA TCTACAGTTT TAATGTATTG GTTGAGTGCG GCTTTATTGT GTTGTTGGTT GCACTCACCT GGGGCTGGGT AGGGGAGAGG CTCCCCTTGT CTGAAGTGTT GATTTTTTTA ATTGCTGCAG TACGGTTTTT CCGTCCTTTA CTCAACATGT CGATGTTTTT GGCAGAGCTA AATTACTTTG GGTTAGCCGT AGAGCGAGTC GAAAAGGTTT TTGCTATTCC TGAACTTGTT CATGGTAATT TACAGCCTAA TATTACTGAT ATGCGGATTC GATTGGATAA TGTTTGTTTT GCATATCCGG ATAAACCATT GCTATTTAAT CATCTCAATC TCACGATAGA GAAAAATAAG ATTACTGCAT TGGTCGGGCC TTCCGGTTCG GGGAAATCAA CACTGGCATC ATTAATTGCA CGTTTTTGGG ATATTGAACA AGGCCATATA TTGGTTGGCG ATAAAGCTAA TGAAATGAGT CTTGCAGAGA TAGATGTGGA CTATTGGCAG CGCCATTTAA GCGTAGTCTT CCAAAAAAGC TATGTGTTAA ATGAGACGAT CGCCAATAAT TTAAGGGTTG CCTGCCCTGA TGCGACGAAT GAGCAGTTGC TGTCGGTTTG CCGTGCAGCA CAACTCTTGC CATTGCTTGA TAAGCTCCCC TCAGGGTTAG ACACCGAGAT CGGGGCGGGT GGTGTGCATC TCTCCGGTGG GGAGTTACAG CGGCTGGCCA TTGCCAGAGC TTTATTAAAA GATGCGCCCT TGATTATTTT AGATGAAGCC ACCGCATCAC TCGATCCAGA AAATGAACAA GATATTCAGT TGGCAATGCA AGCCTTAATC CGAGGGAAAA CCGTGCTGGT GATTGCGCAT AAATTATCTT CTATTCAATA TGTCGATCAT ATTATTGTTA TGGATAGCGG GCAGATTGTT GAAGAAGGGG ACCATTCGAC ACTTATTCAG CATCAAGGGC TTTACGCTGA ATTATGGTCA TTACAACAGC AAGCACAAGC CTGGCAACCA GGGAGACTGG GTGAATAG
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Protein sequence | MIKLSGLSTL TGGRLKGLKG MVSIAIIDAF LASLPYAFLY YIVLDMLSSH PDAIYQLKLT GFCGLLMLVR VILARVLYFH VAIIGFNAGA KIRIRLGEHL RRLPMGFFYR SDMSSVNNTL LKDIDMIENI FTHLYAPIIA TASVLCFFSL GLLLKDWRMA LAMLSTLPLA VCAYILTRRY AQRWQEYMQL LMFKLNDTLM EYIDGLKELK AYRMTGAAFQ RLSQVLTTTY QQSLTAEKAG VWPIYSFNVL VECGFIVLLV ALTWGWVGER LPLSEVLIFL IAAVRFFRPL LNMSMFLAEL NYFGLAVERV EKVFAIPELV HGNLQPNITD MRIRLDNVCF AYPDKPLLFN HLNLTIEKNK ITALVGPSGS GKSTLASLIA RFWDIEQGHI LVGDKANEMS LAEIDVDYWQ RHLSVVFQKS YVLNETIANN LRVACPDATN EQLLSVCRAA QLLPLLDKLP SGLDTEIGAG GVHLSGGELQ RLAIARALLK DAPLIILDEA TASLDPENEQ DIQLAMQALI RGKTVLVIAH KLSSIQYVDH IIVMDSGQIV EEGDHSTLIQ HQGLYAELWS LQQQAQAWQP GRLGE
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