Gene YPK_0642 details

Gene Information

• Locus tag: YPK_0642
• ID: 6090898
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 700704
• End bp: 701324
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641595705
• Product: putative signal transduction protein
• Protein accession: YP_001719398
• Protein GI: 170022893
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3103] SH3 domain protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000000817142
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAAAT TACGCCTAAT TTGCCTCACG ATACTCAGTT TAAGCCTCTC TTGGGGCGCA 
CAAGCTGAAG AAAAACGCTA TATATCAGAT GAACTGGATA CTTACGTTCA TAGCGGTCCA 
GGTAACCAAT ACCGTATTGT CGGCACACTC AAAGGCGGGG ATGAGGTCAC CCTGATAAGC 
GTTGATAACG GTACAAATTA TGGTCAGATC CGTGACAGTA AAGGAAAAAC CACGTGGATC 
CCATTGAATC AGTTGAGTGA AACGCCAAGC CTGCGCGTTC GTGTACCCGA CCTTGAGCAA 
CAGGTTAAAA CACTGACCGA CAAGCTAGCT AATATTGATA ATAGCTGGAA TCAGCGCACG 
GCAGAGATGC AACAGAAAGT GGCGGCCAGC GATAGTGTTA TCTCTGAATT GCAAAAAGAA 
AATGAATCGC TGAAAAACCA ACTCATTGTT GCTCAGAAAA AAGTTAATGC CGTCAATCTA 
CAATTGGATG ACAAGCAACG CACTATTATT CTTCAATGGT TTATGTACGG CGGTGGTGTT 
GCGGGGATTG GCCTGCTCCT TGGTTTAGTG TTGCCACATT TGATCCCAAG CCGTAAGAAG 
AACAACCGCT GGATGAACTG A 

 

Protein sequence

MQKLRLICLT ILSLSLSWGA QAEEKRYISD ELDTYVHSGP GNQYRIVGTL KGGDEVTLIS 
VDNGTNYGQI RDSKGKTTWI PLNQLSETPS LRVRVPDLEQ QVKTLTDKLA NIDNSWNQRT 
AEMQQKVAAS DSVISELQKE NESLKNQLIV AQKKVNAVNL QLDDKQRTII LQWFMYGGGV 
AGIGLLLGLV LPHLIPSRKK NNRWMN