Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0564 |
Symbol | |
ID | 6088981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 621308 |
End bp | 621877 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641595626 |
Product | acid-resistance membrane protein |
Protein accession | YP_001719320 |
Protein GI | 170022815 |
COG category | [S] Function unknown |
COG ID | [COG3247] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0489975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAATA TCGATCAAAA ATACCTAACG AACCTCGATG AAAGCGCGTT AAAAAAACAA CGGATCTTTA TGCGGATCGT TGCTGTTTTA CTGCTGCTTG GCGGAATTTT CTGTCTTATT AACCCGTTAG CTTCAGGTGC AGCGCTCAGT ATGGTCATTG GGATTCTGCT GCTACTCAGT GGTATTGCGA TGATAGTCGG CATGATTGCC AACCGCTCAG ATAACTTTTG GCCAATGGTG GCGGGTATTT TGCTGGGCGT GGCATATATC GTGATGGGTT ATGTATTCAT TACCAATCCT GCGATAGGCA TGATCAGTCT GGCCGTGGTC CTTGCGGTAC TCTTTGCTTT TGGTGGGGTG CTCCGGTTGA TCAACGGCTT TAAGGATCTA AAAAGACCGG GAGCCTGGCT ACAAATTTTA CTTGGGGTGC TGGATCTGGT GATCACCTAT CTTTTGGTCA GCGCCGGGCC ATTGATGTCA ATCACCATGG TTACCACACT CGTGGGGATT GAAATGCTGT TCAGTTCGTT CAGTTGCTTT ATGGTTGCTA GTCTATTTAA ACGCAGCTAA
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Protein sequence | MLNIDQKYLT NLDESALKKQ RIFMRIVAVL LLLGGIFCLI NPLASGAALS MVIGILLLLS GIAMIVGMIA NRSDNFWPMV AGILLGVAYI VMGYVFITNP AIGMISLAVV LAVLFAFGGV LRLINGFKDL KRPGAWLQIL LGVLDLVITY LLVSAGPLMS ITMVTTLVGI EMLFSSFSCF MVASLFKRS
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