Gene YPK_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0560 
Symbol 
ID6089878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp613538 
End bp614047 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID641595622 
Producthypothetical protein 
Protein accessionYP_001719316 
Protein GI170022811 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTAT TGACCTATCT ACAAGGTTAT CCAGAACACT TACAAACTCA AGTCCGCCAG 
TTGATCACTG AACAACGGTT GGGGAATGTC TTACGCCAAC GCTATCCACA ACCTCATGAT
TACAATACGG ATAAAACGCT GTATCACTAC ACGATTGAAT TGAAGAACCA GTATCTGCGC
AATGCACAGC CGTTGAGCAA AGTCGCCTAT GACAACAAAA TTCAAGTGAT GAAGCATGCG
CTAGGTCTGC ACACGGCCAT CTCTCGGGTA CAAGGGGGGA AATTAAAATC CAAGGCGGAA
ATTCGGGTGG CTACAGTGTT TAAAAATGCC CCGGAGGCCT TCCTGAAAAT GATTGTGGTC
CACGAATTGG CACACCTGAA AGAAAAAGAT CACAACAAAG CATTCTATAA TCTGTGTTGC
CATATGGAGC CGCAATATCA TCAGCTAGAG TTTGATACCC GCCTCTATCT GACTCACTTA
GATTTGTTTG GCTCGATTTA TGCGTATTAG
 
Protein sequence
MSVLTYLQGY PEHLQTQVRQ LITEQRLGNV LRQRYPQPHD YNTDKTLYHY TIELKNQYLR 
NAQPLSKVAY DNKIQVMKHA LGLHTAISRV QGGKLKSKAE IRVATVFKNA PEAFLKMIVV
HELAHLKEKD HNKAFYNLCC HMEPQYHQLE FDTRLYLTHL DLFGSIYAY