Gene YPK_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0504 
Symbol 
ID6089679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp556049 
End bp556336 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content38% 
IMG OID641595566 
Productputative sigma(54) modulation protein 
Protein accessionYP_001719260 
Protein GI170022755 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.631528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTCA ATATTACCGG TCATCATGTC GAAATAACCG AAGCATTACG CGAGTTTGTT 
ACCACAAAAT TTGCCAAACT TGAGCAATAT TTTGATCGAA TTAACCAAGT ATATGTGGTT
CTAAGTGTCG AAAAAGTAAA ACAAATTGCA GAAGCAACGG TACATGTGAA TGGAGGCGAG
TTGCACGCAA GCTCGGAACA AGAAGATATG TATGCAGCAA TTGATATTTT GGTTGATAAA
CTGGCTCGCC AGTTGAACAA GCATAAAGAT AAATTGAAAC AACATTAG
 
Protein sequence
MQLNITGHHV EITEALREFV TTKFAKLEQY FDRINQVYVV LSVEKVKQIA EATVHVNGGE 
LHASSEQEDM YAAIDILVDK LARQLNKHKD KLKQH