Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0486 |
Symbol | |
ID | 6090230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 539257 |
End bp | 540726 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641595548 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_001719242 |
Protein GI | 170022737 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCAC AAAATCCTTT ACAACATCAA CGACAGCACG ACGGTATATA CCACATTGGC TATTTTGTCG GTGGAAAATG GTCTCAGGCA CAGGAGCAAT TTGACGTCTG CAACCCGGCA ACCGGCGAGC TGGTCGCCAG AGTGGCTAAA TCCGGTAAAC AAGAAACCGA AGCGGCGATT AAAGCTGCCA GCGAGGCTTT CCCTGCCTGG CGAAAAACGC CCGCTAAACA GCGAGCAGAG ATTTTACAGC GTTGGTATTT GCTGATAATG GAACATCAGC AATCATTGGC AGAGCTGATG GTCTCCGAGC AAGGTAAACC CTTAAAAGAA GCCTTGGTTG AAGTGGCTTA TGCCGCCAGT TTTATCCAAT GGTTTAGTGA GCAGGCCAAG CGGGCTAACG GTGAAATTAT CCCGTCAGCC AAAGAGGGCG CACGTATCCT GGCGACCCGA GAACCTATTG GTGTGGTAGC CGCTATCACA CCGTGGAATT TCCCGCTCGC GATGCTCACC CGCAAACTGG GGCCAGCACT GGCCGCCGGT TGTACCGGGC TGATTAAACC CGCTAATAAC ACGCCATTAT CTGCCTTCGC CTTACTGGCA CTGGCAGAAC AGGCTGGCGT GCCAGCTGGG GTACTCAATG GTGTCGTGGG GGATACTCAT GCTATCAGCG ACGCGATTAT GGCCAGTTCA GACGTGCGTA AAATCTCTTT TACCGGCTCA ACCAATGTCG GTAAGACGCT GATGCGCAAT GCTGCTGCAA CCATGAAGAG AATTTCGATG GAGCTGGGCG GTAACGCGCC TTACATCGTT TTTGATGATG CCGATTTAGA GGCGGCGGTC GCCGGGGCTA TGGCGTGTAA ATTCCGTAAT GCCGGGCAGG TGTGTGTGTG CGTCAATCGC TTCTATATTC AGGATGCTAT CTACGACGAG TTTGTTAACC GCTTGGCTGC CGAGGTGAAA AAACTGAAGG TCGGCAACGG GATGGATAAA GACGTCAACA TGGGGCCGTT GATTAATTTG GCTGGTCTGG AGAAAGTAGA AGAGCACGTA AAAGATGCGC TTGAGAAGGG GGGGCGTCTT TTAGCGGGGG GGCATCGCCA TGCGCTGGGC GGTAATTTCT TCCAGCCAAC GGTGATTGCA GATGCCAATG AGCAGATGAA AGTGGCCTCG GAAGAGACAT TTGGCCCGCT GGCCGCCTGC TTCCGTTTCA GCACTGAAGC CGAAGTGATT CAACGGGCCA ATAATACGCC ATTTGGGCTG GCGGCCTATT TCTATACGCA GAACTTGCAA CGGGTGTTCC GCGTTTCAGA GGCGTTGGAA AGCGGTATGA TTGGCGTCAA TGAATGCTCG GTTTCGACCG AGTTGGCCCC TTTCGGTGGT GTTAAAGAGT CTGGCCTAGG TCGTGAAGGT TCGGTGCTGG GGTTGGATGA ATTTATGGAA GTGAAAACCC TGCATTTGGG TAACTTGTAG
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Protein sequence | MPAQNPLQHQ RQHDGIYHIG YFVGGKWSQA QEQFDVCNPA TGELVARVAK SGKQETEAAI KAASEAFPAW RKTPAKQRAE ILQRWYLLIM EHQQSLAELM VSEQGKPLKE ALVEVAYAAS FIQWFSEQAK RANGEIIPSA KEGARILATR EPIGVVAAIT PWNFPLAMLT RKLGPALAAG CTGLIKPANN TPLSAFALLA LAEQAGVPAG VLNGVVGDTH AISDAIMASS DVRKISFTGS TNVGKTLMRN AAATMKRISM ELGGNAPYIV FDDADLEAAV AGAMACKFRN AGQVCVCVNR FYIQDAIYDE FVNRLAAEVK KLKVGNGMDK DVNMGPLINL AGLEKVEEHV KDALEKGGRL LAGGHRHALG GNFFQPTVIA DANEQMKVAS EETFGPLAAC FRFSTEAEVI QRANNTPFGL AAYFYTQNLQ RVFRVSEALE SGMIGVNECS VSTELAPFGG VKESGLGREG SVLGLDEFME VKTLHLGNL
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