| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0478 |
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| Symbol | |
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| ID | 6087064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 522649 |
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| End bp | 527118 |
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| Gene Length | 4470 bp |
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| Protein Length | 1489 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641595540 |
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| Product | virulence plasmid 65kDa B protein |
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| Protein accession | YP_001719234 |
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| Protein GI | 170022729 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.174725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA GTAAACAGCA AGTGGCCGTT GCTCCCTTGT CGCTCCCTAA AGGGGGCGGT
GCGATTACCG GTATGGGCGA TAGTTTAGGT CCTATCGGCC CCAGTGGCAT GGCAACACTG
ACGCTGCCCC TGCCGATCTC CGCAGGCCGC GGTTACGCCC CCTCGCTCAC GCTAAGTTAC
AGTAGCGGCA GTGGTAACGG CCCGTTTGGC CTTGGCTGGC AACTCGGCAC CATGGCGATT
CGCCGCCGAA CCAACGCCCA AGTGCCACGT TACGATGAGT ATGATGAATT TCTGGCTCCC
AATGGGGAAG TCATGGTGGT TGCCGCGGAT CCGCAGGGCA ATATCGAACG CACTGAACAG
TCACTAAATG GGGAACAATT CAGCGTAATT CGTTACTTAC CACGTATTGA AGGCAATTTT
CATCGCATTG AGTATTGGCG ACCCCGGACA AATAACAGCC AGGCACCGTT TTGGTTAGTC
CACAGTTCAG ATGGCCAAAA ACACGGTTTG GGATATTCCG CCTCAGCCCG AATTGCCGAT
CCACTGCACC CTGAGCATAT TGCTGAATGG CTACTGGAAG AGTCGGTGTC TCTGAGCGGT
GAGCATATCT GCTACCAGTA TCAGGCAGAA GATGAACAGG ATATTGACGA ATCTGAGAAA
CAAAATCATC CGGCAGCCAG TGCGCAACGC TATCTAAGCA CCGTGGTTTA TGGCAATAGA
GAAGTGGCGC ATGAACTCTA TTGTCTGACT CAGCGACCTG CGCCGACAAG CTGGTTATTT
AGCCTGATCT TCGATCACGG CGAATACAGT AATATTGCGG AGCAGGTGCC GGTAATCATA
AAAGGAAAAT CTTGGAATTT CCGTCAGGAC GCCTTCTCAC GCTTTAGTTG CGGCTTTGAA
GTGCGTACCC GCCGCCTGTG TCAGCAAGTG TTGATGTACC ATAATTTGTC AGCGCTTAAA
GGTGATGAAC CCGATGCTCA AGCCACGCTG GTTAGCCGTC TGCGTTTACA CTATCAGCAC
GATGCTTATG CCACCCAACT GGTGGGTTGT CAGCAGTTAG CCCATGAACC CGATGGCACC
AAACGTAGCC TGCCACCGCT AGAATTTGAT TATCAGGATT TTTCAACGCG TGACGCCCTT
GGTTGGCAAC CACTTACTGA TTGGGCTGAA TTTAACTATC AGTACCAAAT GGTGGATCTC
AACGGTGAAG GGATACCGGG GATGTTGTAT CAGGACAGCG GTCACTGGAT TTATCGCCCA
CCGGTTCGCC AACCAGGCAC CGCCGACGGC ATCACTTTTG GCGCGGCCCA ACGGTTACCG
AGCCTACCCG CGATGCGCGA AAATGCCATG TTGATGGATA TCAATGGTGA CGGCAAGCTG
GATTGGGTGA TCAGTCAACC GGGCTTAGCG GGCTACTTTA GCCGTGATCC TGACCTTAGC
CGTGATCCTG ATCTTAGCTG GACACAATTC ATCCCGTTAT CTACCTTGCC AGCGGAGTAT
TTCCATCCAC AAGCGCAACT GGTCGATTTA GCCGGCAGCG GGTTATCTGA TCTGGCGTTA
GTCGGGCCAA AAAGTGTCCG CGTGTATACC AATCTGTGTG ACAGTTTTGC TGCCGCAACC
CAAGTAGCAC AAGATGATGA CATCACGCTA CCACTGCCCG GAGTTCACTT CACTGAACTG
GTGGCGTTCA GCGATGTGAT GGGGTCGGGC CAACAACATC TGGTGCGAAT ACGCCACAAT
AGCGTCACCT GCTGGCCCAA TCTCGGCCAT GGCCGTTTTG GTCACCCCCT CTCTTTACCG
GGGTTTAACC AGCCCATTGA GCAATTTAAT CCGCTAGCGA TCTATCTGGC GGATATTGAT
GGCTCCGGTA CCATTGACCT TATTTATGCC ACCACCAGCC AACTGCTGAT TTACCGCAAC
CAGAGTGGTA ACCGCTTTGC CGAACCAGTG GCTATCGCAT TGCCAACAGG CATTCGCTTT
GATAATAGCT GCCAACTGTC ACTGGCAGAT ATTCAGGGGC TGGGCGTGGC CAGCATCATG
TTGAGTGTGC CGCACCCCAC CACACAACAT TGGCGCTATG ATTTTGTCGC CAGTAAACCC
TATTTACTGT GCACCACCAA CAATAATATG GGCGCAGAGA GTCAGTTGTT TTACCGCAGT
TCAGCCCAAT TCTGGCTGGA TGAAAAAGCG CAGGCGGCCA AACAGGGCCG ATCACTGGCC
TGCCAGTTAC CCTTTCCGAT CCATCTATTA GCGCAAACCA CACAACTTGA TGAGATCACC
GGAAACAGCC TGAGTCAAAC CGCCCGCTAC TTCCATGGTT TTTATGATGG CGTACAACGT
GAATTCTGTG GTTTTGGCCG TGTCGATACG CTGGATACCG ATACCTCCGC ACAAGGCAGC
GCCGCTGAAC GCACTGCGCC GACCAAAAGT AGTAACTGGT TCCATACCGG CCGGGCAGAC
AATGAGACAC TATGGCAAAG TGAGTACTGG CAGGGCGATG ACCAAGACTA CCCATTACTT
CCCACCCGTC TGACAAAATT TATTAACGAT ACCCAAGGTG ACGACGTACT CAGTGAACTC
GATGATAATC AAACGTTTTG GTTACACCGG GCACTGAAAG GTTCATTGTT GCGCAGCGAA
CTCTATGGTC TGGACGGTAG CGAACTGGCC ACACAACCCT ATAGCGTCAA CAGTGCTCGC
TATCAGGTGC GGCAAATTCA ATCCTCTACG GATGAAATAA CCTCCCCGGT AGCATTACCG
ATGATGCTGG AACAACTCAA CTATCACTAC GAACGCATAG TGCAAGACCC GCAATGCAAC
CAACAGATTG TGCTACGTTG CGATGAATTT GGTCACCCAT TGCACAGTGC GACAATCTAT
TATCCACGCC GCGATAAAGC CAGTATTCCT CCGTATTCCT GGCTGGCTGA AGGACATTGG
GACAGCCATT TTGACGAGCA GCAGCAGCAG TTGCGCATCA CTGAAAGCCA GCAATCTTAT
CACCATGAGA TCAGTGATAA ATTCTATGTG CTAGGCCTGC CGGCCGGGCA GCGCAGTGAT
GTACTGACCT ATCCAGACAA TTTCGTGCCT ACAGCGGGGA TTCATTGGGA AGAATTACAA
CAACCAGAGG GCCTGCTCGG TACTAAAGCA GAGCGAACCT TTGCCGGGCA GCAGCAGGTT
TTCTACGCCT CGGACACCAT TCCGGGCCTG GTTGCCTATA GCCAACAGGC GGAATTTGAC
GATCAAACCT TGGCCGCGTT GGATGAATTA TTACCAACGA ATGAGCGTGA ACAACAGCTT
ATCGAGGCAG GTTATCAACG AGCACCCCGT CTATTTTCTC GCCCCGGAGA AACAGATATT
TGGGCCGCCC AACGTGGGTT TACTGACTAT GGCGATGCAT CTCGTTTCTA CCGCCCCATC
AGTCAACGTA GCTCACCATT GGTAGGAAAA ACAGCCTTAG AATGGGATAA AAATAGCTGT
GCCATTACCC AAATGATATT GGCTGATGGC AGTACCACCC AGGCTGAATA TGATTATCGT
TTTATCACCC CTTATCACCT CACGGATATC AACGATAACT CCCGTCATAT TGAACTGGAT
GCGCTGGGGC GCGTCACCTC CAGCCGTTTT TGGGGCACCG AGCTTGACTC ACAAACCGGT
GAGGTCAGCA CAACCGGTTT CCCTTTAATC GCTGAGCCCC CCTTTACCGT ACCCAATTCA
GTTGATGCCG CTATCAGCAT GGAGAATACC CAGGTTCCCG TCGCGCAATT CTCTGTCTAT
CAACCTCAAA GCTGGATGAT TTCGTTACAG CTTGATGACA TTGAAACATT GTCTGAAACC
AATAACGTCA CTCTAGAATA TCTATTCCAG AATCATATTC TGATCGATAA CTATTATCTT
TGCCCCCTTG CGCTACGTCG CTGGATAAGA CAAAGCAACC CTCTCATCAC CGAATACGTC
GGCCTGACAT TGAAAAATCC CGTGCGCCAA CCCCCCCATG TCTTAACCGT CGTCGTGGAT
AACTACTTTT CTGCTGCTGA GCCACAACAA CATCAACAAA CTCTCGCTTT CAGCGACGGC
TTTGGCCGCG TGTTGCAAAG CGCGCAACGG GTGGAGGCAG GAACCGCTTA TTTCCACACA
GGAGAGGGCG GTCTGGAGAT GGATCAACAA GGTCATCTCA CGCAAGACGA GAGCGATCAA
CGCTGGGCAG TTTCTGGCCG TACCGAGTAC GACAATAAAG GTCTGCCTAT CCGCCGCTAT
CAACCCTATT TCCTCGATGA CTGGCGTTAT ATCGCGGATG ACAACGCCCG CAAAGAAGCC
TGGGCCGACA CCCATATTTA CGACCCACTC GGACGAGAAA TAAAAGTGAT CACCGCCAAA
GGTTACCTGC GACGAGCACA CTATTTCCCG TGGTTTGTTA TCAGCGAGGA TGAAAATGAC
ACGGCGTCAG AAATCACGCC GAATCCCTAA
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| Protein sequence | MENSKQQVAV APLSLPKGGG AITGMGDSLG PIGPSGMATL TLPLPISAGR GYAPSLTLSY
SSGSGNGPFG LGWQLGTMAI RRRTNAQVPR YDEYDEFLAP NGEVMVVAAD PQGNIERTEQ
SLNGEQFSVI RYLPRIEGNF HRIEYWRPRT NNSQAPFWLV HSSDGQKHGL GYSASARIAD
PLHPEHIAEW LLEESVSLSG EHICYQYQAE DEQDIDESEK QNHPAASAQR YLSTVVYGNR
EVAHELYCLT QRPAPTSWLF SLIFDHGEYS NIAEQVPVII KGKSWNFRQD AFSRFSCGFE
VRTRRLCQQV LMYHNLSALK GDEPDAQATL VSRLRLHYQH DAYATQLVGC QQLAHEPDGT
KRSLPPLEFD YQDFSTRDAL GWQPLTDWAE FNYQYQMVDL NGEGIPGMLY QDSGHWIYRP
PVRQPGTADG ITFGAAQRLP SLPAMRENAM LMDINGDGKL DWVISQPGLA GYFSRDPDLS
RDPDLSWTQF IPLSTLPAEY FHPQAQLVDL AGSGLSDLAL VGPKSVRVYT NLCDSFAAAT
QVAQDDDITL PLPGVHFTEL VAFSDVMGSG QQHLVRIRHN SVTCWPNLGH GRFGHPLSLP
GFNQPIEQFN PLAIYLADID GSGTIDLIYA TTSQLLIYRN QSGNRFAEPV AIALPTGIRF
DNSCQLSLAD IQGLGVASIM LSVPHPTTQH WRYDFVASKP YLLCTTNNNM GAESQLFYRS
SAQFWLDEKA QAAKQGRSLA CQLPFPIHLL AQTTQLDEIT GNSLSQTARY FHGFYDGVQR
EFCGFGRVDT LDTDTSAQGS AAERTAPTKS SNWFHTGRAD NETLWQSEYW QGDDQDYPLL
PTRLTKFIND TQGDDVLSEL DDNQTFWLHR ALKGSLLRSE LYGLDGSELA TQPYSVNSAR
YQVRQIQSST DEITSPVALP MMLEQLNYHY ERIVQDPQCN QQIVLRCDEF GHPLHSATIY
YPRRDKASIP PYSWLAEGHW DSHFDEQQQQ LRITESQQSY HHEISDKFYV LGLPAGQRSD
VLTYPDNFVP TAGIHWEELQ QPEGLLGTKA ERTFAGQQQV FYASDTIPGL VAYSQQAEFD
DQTLAALDEL LPTNEREQQL IEAGYQRAPR LFSRPGETDI WAAQRGFTDY GDASRFYRPI
SQRSSPLVGK TALEWDKNSC AITQMILADG STTQAEYDYR FITPYHLTDI NDNSRHIELD
ALGRVTSSRF WGTELDSQTG EVSTTGFPLI AEPPFTVPNS VDAAISMENT QVPVAQFSVY
QPQSWMISLQ LDDIETLSET NNVTLEYLFQ NHILIDNYYL CPLALRRWIR QSNPLITEYV
GLTLKNPVRQ PPHVLTVVVD NYFSAAEPQQ HQQTLAFSDG FGRVLQSAQR VEAGTAYFHT
GEGGLEMDQQ GHLTQDESDQ RWAVSGRTEY DNKGLPIRRY QPYFLDDWRY IADDNARKEA
WADTHIYDPL GREIKVITAK GYLRRAHYFP WFVISEDEND TASEITPNP
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