| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0472 |
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| Symbol | tldD |
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| ID | 6090516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 516724 |
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| End bp | 518169 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641595534 |
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| Product | protease TldD |
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| Protein accession | YP_001719228 |
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| Protein GI | 170022723 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.696737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCTCT CATTTGTCAG TGAGCAGTTA CTCACTGCTA ACAAGTTGAA CCATGAGGAC
TTGTTCTCAG TGTTGGGGCA GCTAACTGAA CGCCGCCTCG ATTATGCTGA CCTGTATTTC
CAGTCCAGCT ATCACGAGGC CTGGGTGTTG GAAGACAGCA TCATCAAAGA CGGCTCCTAC
AATATTGATC AGGGTGTGGG CGTACGTGCG GTAAGTGGTG AAAAAACCGG TTTTGCCTAC
GCTGACCAAA TCACGTTGAA TGCGTTGCAG CAAAGTGCCC ATGCGGCCCG CAGTATTGTT
CGTGATACTG GCAACGGCAA AGTCCATACC TTGGGTGAGA TTGCCTATCA AGCCTTGTAC
CCGTTGCTTG ATCCACTACA AAGCCTATCG CGGGAAGATA AAATTGCCTT GTTACATCGG
GTCGATAAAG TCGCTCGCGC CGCCGATAAA CGGGTGCAGG AAGTTAGCGC CAGTCTGACC
GGCGTGTATG AACAGATTCT GGTGGCTGCG ACTGACGGCA CCTTGGCTGC CGATGTGCGT
CCGTTGGTCC GTCTTTCGGT CAGTGTACTG GTGGAAGACA ACGGTAAACG TGAACGCGGT
GCTTGCGGTG GCGGTGGCCG TTTCGGTTAT GACTATTTCC TTGAAACCGT TGATGGCGAA
GTGCGGGCAG ATAATTTTGC TAATGAAGCG GTCAGAATGG CGCTGGTTAA TCTTTCGGCT
ATTGCCGCTC CAGCGGGTGC GATGCCGGTA GTGTTAGGCG CAGGCTGGCC GGGTGTGCTG
TTACATGAAG CGGTTGGTCA CGGACTGGAA GGTGATTTCA ACCGTCGAGG CAGTTCGGTA
TTCAGTGGGC AAATGGGCAA ATTGGTGGCT TCAGAACTCT GTACGGTGGT GGACGATGGC
ACCATGCAAG GCCGCCGTGG CTCACTGGCT ATCGACGATG AAGGGGTGCC GGGTCAATAT
AACGTGTTGA TCGAAAATGG CATTCTGAAA GGGTATATGC AGGATAAACT GAACGCGCGT
CTGATGGGGG TAGCCCCAAC AGGTAATGGC CGCCGCGAAT CCTATGCGCA CCTGCCGATG
CCACGCATGA CCAACACCTA TATGCTGGCA GGCCAATCGA CACCGGAAGA TATTATCGCC
AGCGTGGAGT ACGGCCTGTA TGCGCCAAAT TTTGGTGGCG GTCAGGTGGA TATCACCTCT
GGCAAGTTTG TCTTCTCAAC GTCGGAAGCG TACTTAATCG AAAAAGGCAA AATCACTCAT
GCGGTGAAAG GAGCCACCCT GATTGGCTCT GGCATTGAAG CGATGCAGCA GATTTCTATG
GTCGGCAACG ATCTGGCGCT GGATAAAGGC GTTGGTGTTT GTGGCAAAGA GGGCCAAAGC
CTGCCGGTGG GTGTCGGCCA ACCCACGTTG AAGTTGGATA ATTTAACCGT GGGCGGCACG
GCGTAG
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| Protein sequence | MSLSFVSEQL LTANKLNHED LFSVLGQLTE RRLDYADLYF QSSYHEAWVL EDSIIKDGSY
NIDQGVGVRA VSGEKTGFAY ADQITLNALQ QSAHAARSIV RDTGNGKVHT LGEIAYQALY
PLLDPLQSLS REDKIALLHR VDKVARAADK RVQEVSASLT GVYEQILVAA TDGTLAADVR
PLVRLSVSVL VEDNGKRERG ACGGGGRFGY DYFLETVDGE VRADNFANEA VRMALVNLSA
IAAPAGAMPV VLGAGWPGVL LHEAVGHGLE GDFNRRGSSV FSGQMGKLVA SELCTVVDDG
TMQGRRGSLA IDDEGVPGQY NVLIENGILK GYMQDKLNAR LMGVAPTGNG RRESYAHLPM
PRMTNTYMLA GQSTPEDIIA SVEYGLYAPN FGGGQVDITS GKFVFSTSEA YLIEKGKITH
AVKGATLIGS GIEAMQQISM VGNDLALDKG VGVCGKEGQS LPVGVGQPTL KLDNLTVGGT
A
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