Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0454 |
Symbol | prmA |
ID | 6089744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 494640 |
End bp | 495521 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641595516 |
Product | ribosomal protein L11 methyltransferase |
Protein accession | YP_001719210 |
Protein GI | 170022705 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.281322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTGGA TCCAACTAAA ATTAAACACC ACCGGCAACC AAGCCGAATC CCTAGGGGAC GTTCTGGTAG AAAGTGGTGC TGTGTCGGTC ACTTTTCAGG ACACCCACGA TAATCCGGTC TTCGAGCCAC TGCCTGGTGA AACCCGTCTG TGGGGCGATA CCGATGTCAT TGGCCTGTAT GATGCAGAAA CCGATATGGC TGACGTGGTC GCCATGTTGG AATGCCACCC GCAGATCGGC AAAGGCTTTA TCCATAAAAT TGAACAGTTG GAAGATAAAG ATTGGGAACG TGAATGGATG GATAACTTCC ATCCGATGCG TTTTGGTGAG CGCCTGTGGA TCTGCCCAAG CTGGCGTGAT GTGCCAGATC CAACGGCGGT TAACGTTATG CTCGACCCCG GCTTAGCCTT TGGTACGGGT ACCCACCCTA CCACAGCACT ATGCTTACAA TGGCTAGATA GCCTCGATCT CAATGGTAAA ACCCTCATCG ATTTCGGTTG TGGCTCTGGC ATCCTGGCGA TTGCCGCGCT AAAGCTCGGT GCAGCGCGCG CTATTGGCAT TGATATCGAT CCGCAGGCCA TTCAAGCCAG TCGCGATAAC GCGCAGCGTA ACGGCGTTTC AGAGCGTTTG GAGCTGTATC TGGCAAAAGA CCAGCCCGCA GAACTATCTG CTGACGTGGT CGTGGCCAAT ATTCTGGCAG GCCCATTACG GGAACTGGCA CCACTGATTA GCGTTTTACC GACGACGGGC GGCCATCTTG GGTTGTCTGG GGTATTAGCA ACACAAGCGG CGGGCGTCGC ACAGGCCTAT GAGGATAAAT TCATTCTCGA CCCAGTCGCC GAGAAAGAAG AATGGTGCCG CATTACCGGT ATCAAAAAAT AA
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Protein sequence | MPWIQLKLNT TGNQAESLGD VLVESGAVSV TFQDTHDNPV FEPLPGETRL WGDTDVIGLY DAETDMADVV AMLECHPQIG KGFIHKIEQL EDKDWEREWM DNFHPMRFGE RLWICPSWRD VPDPTAVNVM LDPGLAFGTG THPTTALCLQ WLDSLDLNGK TLIDFGCGSG ILAIAALKLG AARAIGIDID PQAIQASRDN AQRNGVSERL ELYLAKDQPA ELSADVVVAN ILAGPLRELA PLISVLPTTG GHLGLSGVLA TQAAGVAQAY EDKFILDPVA EKEEWCRITG IKK
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