Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0431 |
Symbol | |
ID | 6089964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 473102 |
End bp | 474091 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641595493 |
Product | carbohydrate ABC transporter periplasmic-binding protein |
Protein accession | YP_001719187 |
Protein GI | 170022682 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA ATCTCGCATT ACTGAATGTA TGTATCGTTT CTGCATGCAT GCTGTTCACC ACACAAACCC TGGCAGCAGA GAAAAAACAT GAGATTGCCG TTGTAGCGAA AGTGACCGGT ATCCCCTGGT TTACCCGCAT GGAAGTCGGG GTAAATGAAG CCGCGAAGAA GCTGGATGTC AATGCCTATC AAGTCGGGCC AGCGACACCG GACCCTGCGC AACAAGTTAA AGTGATTGAA GATCTTATCG CGAAAAATGT CGATGCCATT ATTGTGGTGC CGAACGATGC CAAAGTGTTG GAGCCCGTGC TGAAGAAAGC ACAGGAAAAA GGCATTGTGG TGCTGACGCA TGAATCCCCA GATCAACGTA TCGGGCAGTG GGACGTCGAA ACTATCGATA GCGAAAAATA TGCTCAAGCC AATATGGATG AGCTGGCAAA AGCCATGGGT AATAAAGGTG GCTATGCCAT TTATGTAGGT TCCCTGACGG TGCCGTTACA TAACGCTTGG GCTGATTACG CTATCAAATA TCAGAAAGAA AAATACCCAG AAATGTTTGA AGTCACGCCA CGTTTACCGG TGGCAGAGAA TATTGATAAG TCTTACTCCA CCACGCTGGA TCTGATGAAA ACATATCCGC AAATGAAAGG GATTATTGGT TTCGGTTCAC TGGGGCCAAT TGGTGCAGGT CAGGCGGTTG CCAAGAAACG GGCTAAGGAC CAAATTGCGG TAGTGGGTAT TGCGATGCCA GCACAGGCCG CGCCGTATCT GATGCGTGGC GATATCAAAA AAGCCTTGCT GTGGGATCCA AAGGATGCCG GTTTTGCGGT AGTAGAAATT GCCAATCAAT TGTTGAATGG CCAGAAAGTG ACAGAAGATT TGACCATCGA TGGCTTGGGT AAAGCCGATG TGGACAGTAA GAACGGGGTG ATCCGTTTTA ACAAGATCCT CGAGGTCACC AAAGATAATG CCAAAACGTT AGGCTTCTGA
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Protein sequence | MKFNLALLNV CIVSACMLFT TQTLAAEKKH EIAVVAKVTG IPWFTRMEVG VNEAAKKLDV NAYQVGPATP DPAQQVKVIE DLIAKNVDAI IVVPNDAKVL EPVLKKAQEK GIVVLTHESP DQRIGQWDVE TIDSEKYAQA NMDELAKAMG NKGGYAIYVG SLTVPLHNAW ADYAIKYQKE KYPEMFEVTP RLPVAENIDK SYSTTLDLMK TYPQMKGIIG FGSLGPIGAG QAVAKKRAKD QIAVVGIAMP AQAAPYLMRG DIKKALLWDP KDAGFAVVEI ANQLLNGQKV TEDLTIDGLG KADVDSKNGV IRFNKILEVT KDNAKTLGF
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