Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0421 |
Symbol | |
ID | 6087528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 459914 |
End bp | 461035 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595483 |
Product | alkanesulfonate transporter substrate-binding subunit |
Protein accession | YP_001719177 |
Protein GI | 170022672 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTAT CTTTCTTCTT TCGTCGTGGG TTCAACGTTC ACCGCTGGCT CAATATCGGG GCAATGGCCG CTATTATTAC GTTAGCGTTT ACTAATACAG TGATTGCACA GGATAGCGCC CCGGCCCAGT TCCGCATTGG GTACCAAAAA GGCTCGGTGA ATCTGGTGTT GGCGAAAACT CACCAATTGC TGGAAAAACG CTTTCCTGAT ACCCAAATTA GCTGGATTGA ATTCCCGGCA GGCCCGCAAA TGCTCGAAGC GTTGAACGTC AACAGCATCG ATTTGGGCAG TACTGGCGAT ATTCCCCCCA TTTTTGCTCA GGCTGCTGGC GCTGATCTGC TGTATGTCGG CATGGAGCCG CCGAAACCGA AGGCAGAAGT GATTTTGGTG CCGGAAAACA GCGCGATTAA CAGCGTTGCT GAACTGAAAG GCCATAAAGT GGCTTTCCAG AAAGGTTCCA GCTCACACAA CCTGCTCTTG CAGGCACTGC AAAAAGCGGG GCTAAAATTT ACCGATATCC AACCTGTCTA CCTCACGCCT GCTGATGCAC GAGCGGCTTT CCAACAGGGC AATGTTGATG CTTGGGTCAT TTGGGATCCC TACTATTCCG CCGCCTTGTT GCAAGGGGGC ATACGGGTAC TGATAGATGG CAGCCAATTA AACCAGACAG GCTCTTTCTA TCTGGCTTCT CGTCCTTATA CCGAAGCTAA CGGCCCATTT ATTCAGCAGG TGCTGGAGGT ACTGACGCAG GCTGATGCGT TGACGCTTAG CGATCGAGCA CAAAGTATCA CGCTACTGGC CAACGCGATG GGGCTACCAG AGGCCGTGAT TGCCAGCTAT CTGGATCATC GTCCCCCCAC GGCTATCCAG CCTTTGAGTC AGGCGACGGT TGCTGCCCAA CAAAGAACGG CCGATCTGTT TTTCGCCAAC CGGCTGTTAC CGGTCAAAGT GGATATTTCG CAACGTGTTT GGCTGCCAGC CGGGCAATTA TCCTCAAAGC CACCATCTTC AAAGCCATCA TCTTCAAACC AATCATCTCC AAGCCAATTA CCTACAGATC AACCGTCTAT AGCGCAGACA TCTATAGAGC AATCATCTAC AGCAAAATCA CAGACCAAAT AA
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Protein sequence | MSLSFFFRRG FNVHRWLNIG AMAAIITLAF TNTVIAQDSA PAQFRIGYQK GSVNLVLAKT HQLLEKRFPD TQISWIEFPA GPQMLEALNV NSIDLGSTGD IPPIFAQAAG ADLLYVGMEP PKPKAEVILV PENSAINSVA ELKGHKVAFQ KGSSSHNLLL QALQKAGLKF TDIQPVYLTP ADARAAFQQG NVDAWVIWDP YYSAALLQGG IRVLIDGSQL NQTGSFYLAS RPYTEANGPF IQQVLEVLTQ ADALTLSDRA QSITLLANAM GLPEAVIASY LDHRPPTAIQ PLSQATVAAQ QRTADLFFAN RLLPVKVDIS QRVWLPAGQL SSKPPSSKPS SSNQSSPSQL PTDQPSIAQT SIEQSSTAKS QTK
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