Gene YPK_0334 details

Gene Information

• Locus tag: YPK_0334
• Symbol: nusG
• ID: 6091164
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 356191
• End bp: 356736
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641595399
• Product: transcription antitermination protein NusG
• Protein accession: YP_001719097
• Protein GI: 170022592
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000111742
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGAAG CACCCAAAAA GCGTTGGTAC GTCGTTCAGG CGTTTTCCGG TTTTGAAGGC 
CGTGTAGCAC AATCGCTACG TGAGCATATC AAGTTACATG ACATGGAAGA GCTGTTTGGC 
GAAGTCATGG TTCCAACGGA AGAAGTCGTA GAGATTCGTG GCGGTCAACG CCGTAAAAGT 
GAACGCAAAT TCTTCCCAGG CTATGTGCTG GTCCAGATGG TCATGAATGA TGCCAGCTGG 
CACTTAGTAC GTAGCGTGCC ACGTGTAATG GGCTTTATCG GTGGTACATC CGATCGCCCG 
GCACCAATCA GTGATAAAGA AGTTGATGCG ATTATGAATC GTCTTCAGCA AGTGGGTGAT 
AAGCCACGTC CGAAAACACT GTTTGAACCA GGCGAATTGG TTCGTGTTAG CGATGGTCCG 
TTTGCAGACT TCAACGGTGT TGTTGAAGAG GTGGACTACG AGAAGAGCCG CTTGAAAGTA 
TCCGTTTCTA TTTTTGGCCG TGCGACACCG GTTGAATTGG ATTTCAGTCA GGTAGAAAAA 
GGCTGA 

 

Protein sequence

MSEAPKKRWY VVQAFSGFEG RVAQSLREHI KLHDMEELFG EVMVPTEEVV EIRGGQRRKS 
ERKFFPGYVL VQMVMNDASW HLVRSVPRVM GFIGGTSDRP APISDKEVDA IMNRLQQVGD 
KPRPKTLFEP GELVRVSDGP FADFNGVVEE VDYEKSRLKV SVSIFGRATP VELDFSQVEK 
G