Gene YPK_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0260 
Symbol 
ID6088776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp299831 
End bp300685 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content55% 
IMG OID641595320 
Producttaurine transporter subunit 
Protein accessionYP_001719026 
Protein GI170022521 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGC ACAGTACGTT ACGTAATCAG GCGATTAATC TGCCCGCTGC AGATGCACCG 
AAAAAAACGC CCCGCCGTTT ACCTGCCAAT CAGACGCTGT GGATCAGTAT CGCCACGTTG
GCTTCGGTGG TGGCTTTATG GTGGGCAGTC ACGGCGTTAC AGCTTATCGG CCCGTTATTT
TTACCTGCTC CACAGCAGGT CTTGCATCAG CTATGGACCA TTGCCAGCCC GCAAGGGTTT
ATGGATGCCA CGCTATGGCA GCATCTGGCT GCTAGCCTTG GGCGAATTTT CGTTGCGTTG
TTGGCGGCAG TGGTACTGGG GGTCCCTACC GGGATCGCCA TGGGGCTGAA CAGTAACGTT
CGTGGTGTGT TGGATCCGTT AATTGAGATT TATCGTCCGG TACCGCCGTT GGCTTATCTA
CCGCTGATGG TTATCTGGTT CGGTATTGGC GAAACCTCAA AAATCCTACT GATTTATTTG
GCGATATTTG CGCCAGTGAC GTTGGCGGCG GTTGCGGGTG TGCGCAGCGT GGCACACGTT
CGAGTGAGGG CCGCCCGTGC ATTAGGTGCC AGCCGTTGGC AGGTTTTATG GTTTGTGGTG
TTGCCCAGCG CCTTGCCGGA GATTTTAACC GGTATCCGCA TCGGCCTGGG GGTTGGGTGG
TCCACTTTGG TGGCCGCTGA GCTGATTGCC GCGACACGGG GATTGGGCTT TATGGTGCAA
TCCGCCGGTG AGTTTTTGGC AACAGATGTG GTCATTGCCG GTATCAGTGT GATTGCCATT
ATTGCTTTTG GGATGGAGTT AAGTTTACGG GCGATTCAAC GCCGGTTAAC GCCTTGGTAT
GGAGAACAAC AATGA
 
Protein sequence
MSLHSTLRNQ AINLPAADAP KKTPRRLPAN QTLWISIATL ASVVALWWAV TALQLIGPLF 
LPAPQQVLHQ LWTIASPQGF MDATLWQHLA ASLGRIFVAL LAAVVLGVPT GIAMGLNSNV
RGVLDPLIEI YRPVPPLAYL PLMVIWFGIG ETSKILLIYL AIFAPVTLAA VAGVRSVAHV
RVRAARALGA SRWQVLWFVV LPSALPEILT GIRIGLGVGW STLVAAELIA ATRGLGFMVQ
SAGEFLATDV VIAGISVIAI IAFGMELSLR AIQRRLTPWY GEQQ