Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0130 |
Symbol | |
ID | 6090733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 157661 |
End bp | 158668 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641595190 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001718896 |
Protein GI | 170022391 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.964935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAC GCAACGGGAT TATTGCCGCC GGTAATATGT TGGTCGACCA TGTTCATCAA ATTGAGCAAT GGCCGCAGCG TGGTTGGCTG GCGGAAATCG TACACAGCGA GCGCTCAACC GGCGGCGCAC CGCTTAACGT ATTGCTGACG CTGGCCAAAA TGTATACCGG GCTGCCGCTG CAGGCGGTGG GCCTTATTGG CGATGATCAT GACGGTGATT ACATTATGGC GATGCTCGAC CAGTATCAGG TCAATCGCCA ACACGTTCGG CGGACCACCT TGGCTCCAAC ATCTATGTCA CAAGTCATGA CCGATCCGAG CGGCCAGCGC ACCTTTTTCC ACTCTCCAGG CACCAACCGC CTGCTCGACT TGCCCGCTTT CGATGGCCTT GATACATCAT TTAAAATTTT CCATCTTGGC TATCTGCTGT TGCTCGATAG TTTGGATGTG GAAGACACCG AGTACGGTAC TCGTAGCGCC AGACTACTAG CGTTGATGTC GCAGCTTGGT TATGAAACCT CCCTCGACTT AGTGTCAAGA GAAGGCGATC CTCGTTATCA TTTACTGGTG ACGCCAACGT TGTGCTGGCT GGATTATCTG ACCATTAATG AACTGGAGGC CGGCGAGTTA AGCGGGCTGG AGATGCGTCT TGCCGATGGC ACCCCGGACG TCCATCATAT CGCTCAGGCG GCAAAACAAT TACTTGAAGC CGGCGTGCGC CAGCGGGTGG TGATTCACTG CCCGGAAGGT GCATGGGGCG TAGATCATGG GCAGGAGGGG GTATGGGTGC CTTCGTGGAA ACTGGCCCAG GAAGAGATAG TTGGTAGCGT TGGTGCCGGG GATGCCTTTT GCGCTGGCAT ATTATATGGC TACCATGAAC GCTGGCCGTT AACTGATTGT ATTCAATTAG CCCACGCCTG CGCCCGTGCC AATTTACTTT GTGCCAATGC TATTGATGGT GCAAAGCCAC TGGCGGAATT AGACGTGTTT ATTCGTGAGA ACCGTTAA
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Protein sequence | MIERNGIIAA GNMLVDHVHQ IEQWPQRGWL AEIVHSERST GGAPLNVLLT LAKMYTGLPL QAVGLIGDDH DGDYIMAMLD QYQVNRQHVR RTTLAPTSMS QVMTDPSGQR TFFHSPGTNR LLDLPAFDGL DTSFKIFHLG YLLLLDSLDV EDTEYGTRSA RLLALMSQLG YETSLDLVSR EGDPRYHLLV TPTLCWLDYL TINELEAGEL SGLEMRLADG TPDVHHIAQA AKQLLEAGVR QRVVIHCPEG AWGVDHGQEG VWVPSWKLAQ EEIVGSVGAG DAFCAGILYG YHERWPLTDC IQLAHACARA NLLCANAIDG AKPLAELDVF IRENR
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