Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0127 |
Symbol | |
ID | 6088481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 155063 |
End bp | 156007 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595187 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001718893 |
Protein GI | 170022388 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTGA AACCCATAAT GACCGCACTA ATCGCGGGGG CCATGATAGC CAGTTCACCG GCGCTCCAGG CGAAAGAGTT GAACTCGATA GGCGTAACGG TGGGCGATCT TGCCAACCCA TTTTTCGTGC AAATCACCAA AGGTGTGGAG TTAGAAGCGC GTAAGTTGGC CGGCGATAAA GTCAAAGTTA CGCTCGTTTC CAGCGGCTAC GATCTCGGCC AGCAGGTGGC ACAGATAGAT AACTTTATTG CCGCCAAAGT GGACATGATC ATTCTCAATG CCGCGGATTC TAAAGGGATC GGTCCGGCGG TGAAGCGTGC TAAAGATGCC GGTATTGTCG TGGTGGCAGT GGATGTGGCA GCAGAAGGGG CTGACGCAAC GATTACCTCT GACAACACTC AGGCCGGTGC GATGGCGTGT AAGTACATAT CCGACCGTCT GAAAGAGAAA GGCAACGTGG TTATTATCAA CGGGCCGCCA GTGTCTGCCA TACAAAACCG TGTTGAAGGT TGTGAAAGCG AATTCAAAAA ATATCCTGAT ATCAAGGTCC TTTCTTCTAA CCAAAATGCT AAGGGCAGTC GAGAAGGTGG CCTGGAGGTG ATGACCTCTT TGCTGGCGGT GAACCCGAAG ATCGATGGCG TGTTTGCCAT CAATGATCCA ACGGCGATTG GGGCTGATTT GGCTGCCAAA CAGGCACAAC GTAATGAATT CTTTATTGTT GGCGTGGACG GCAGCCCGGA TGCAGAAGAA GCGCTGAAAC GGGGTGGTAA CACATTGTTT GTCGCGACTC CAGCGCAAGA TCCTCAGGTC ATGGCCTCCA AAGCCGTTGA GGTTGGTTAT GGCATCTTGC AGGGCAACCC AGCCCCAAAA GATCCCATTT TGATACCAGT GACCCTGATC GACAAAAATA ATATCAGCAC TTACAAAGGC TGGACGATGA AATAA
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Protein sequence | MRLKPIMTAL IAGAMIASSP ALQAKELNSI GVTVGDLANP FFVQITKGVE LEARKLAGDK VKVTLVSSGY DLGQQVAQID NFIAAKVDMI ILNAADSKGI GPAVKRAKDA GIVVVAVDVA AEGADATITS DNTQAGAMAC KYISDRLKEK GNVVIINGPP VSAIQNRVEG CESEFKKYPD IKVLSSNQNA KGSREGGLEV MTSLLAVNPK IDGVFAINDP TAIGADLAAK QAQRNEFFIV GVDGSPDAEE ALKRGGNTLF VATPAQDPQV MASKAVEVGY GILQGNPAPK DPILIPVTLI DKNNISTYKG WTMK
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