Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0123 |
Symbol | |
ID | 6090951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 148262 |
End bp | 149644 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595183 |
Product | hypothetical protein |
Protein accession | YP_001718889 |
Protein GI | 170022384 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.291133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGTTA TATCAGCGAG TTACTTAGTT TTACCGAATA TAACATTTTC TTACTATGGC GCTCTGCCAG CAGGGGACTT ACAATCTCCC ACCGCTAATT TGTCGGCTGA AGATAACCAA AAATACGATA AGCAGCCAAA AGCGGGCAAT TTTGCAGCAA TGATGATTTT ATTCAATGAG GCCAGTGTGG AACAGTTTGA TGTGGTAGTC ATAGGTGCGG GTGCGGCAGG GCTATTTTGT GCGGCTCAAG CGGGGCAAGC AGGGTGCCGA GTGCTGTTAG TGGACAACGG TAAGAAAGCC GGGCGCAAGA TATTGATGTC CGGCGGTGGC CGTTGCAACT TTACGAACAT TTATACGGAA CCTGCGGCTT ACCTCTCACA AAACCCTCAC TTCTGTAAAT CTGCATTGGC GCGTTATACT CAGTGGGATT TTATCGACCT GATGAATCGC CACAACATCG CCTGGCATGA AAAAACGCTG GGGCAGCTTT TTTGTGATGA TTCCGCTCAG CAGGTCGTCG ATCTGTTACT GAAAGAGTGT GAGCTGGGGA ATGTCACTGT GCGGCTGCGC AGTAATGTGT TGTCGGTTGA AAAAAGCGAC ACGGGCTTTG TGCTACACAT TAATGATTTG AAAGTGAGCG CTAACTCACT TGTTGTGGCT TCTGGTGGTT TATCGATGCC GGGGCTGGGG GCATCTCCGT TTGGTTATAA GCTGGCGGAA CAGTTTGGTT TGAAGGTGTT ACCAACCCGA GCGGCATTGG TTCCTTTCAC GTTGCATAAA CCCTTGTTGG ATCACGTGCA AACGCTGTCT GGTGTCTCGG TTCCGGCGGT GGTGACGGCG GAGAATGGCG TTAGCTTCCG TGAAAGTATT TTATTTACCC ACCGTGGGCT TTCTGGCCCG GCTATCCTAC AACTCTCAAG CTATTGGCAG GCTGGCGAGT ATGTGAGTAT TAACTTACTT CCTGATGTCG ATCTGGCTGC CTTTTTGAAC ACCGAGCGGC AAGCCCATCC AAACCAGACG CTAAAAAACA CACTGGCTCA ATTATTACCC AAGCGATTGG TCGAGTGCCT GCAAACATTG GAACAACTGC CTGATGTTAC CCTGAAGCAG CTTAATGTTC CCCAGCAGGC GGCATTAATT GCGAATCTTC AGCAGTGGCG GGTGCAACCC AACGGGACGG AAGGCTACCG TACCGCAGAA GTCACGTTGG GGGGGGTCGA TACCCAAGAG CTCTCTTCCA AGACCATGGA AGCCCATAAG GTGCCGGGGC TGTACTTTAT TGGCGAAGTC GTTGATGTCA CTGGTTGGCT AGGCGGTTAT AACTTCCAAT GGGCCTGGAG CTCGGCTTGG GCTTGCGCGC AAGGGCTGGC GGCGAAGAAG TAA
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Protein sequence | MYVISASYLV LPNITFSYYG ALPAGDLQSP TANLSAEDNQ KYDKQPKAGN FAAMMILFNE ASVEQFDVVV IGAGAAGLFC AAQAGQAGCR VLLVDNGKKA GRKILMSGGG RCNFTNIYTE PAAYLSQNPH FCKSALARYT QWDFIDLMNR HNIAWHEKTL GQLFCDDSAQ QVVDLLLKEC ELGNVTVRLR SNVLSVEKSD TGFVLHINDL KVSANSLVVA SGGLSMPGLG ASPFGYKLAE QFGLKVLPTR AALVPFTLHK PLLDHVQTLS GVSVPAVVTA ENGVSFRESI LFTHRGLSGP AILQLSSYWQ AGEYVSINLL PDVDLAAFLN TERQAHPNQT LKNTLAQLLP KRLVECLQTL EQLPDVTLKQ LNVPQQAALI ANLQQWRVQP NGTEGYRTAE VTLGGVDTQE LSSKTMEAHK VPGLYFIGEV VDVTGWLGGY NFQWAWSSAW ACAQGLAAKK
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