Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0098 |
Symbol | |
ID | 6090753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 115940 |
End bp | 117229 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641595158 |
Product | C4-dicarboxylate transporter DctA |
Protein accession | YP_001718864 |
Protein GI | 170022359 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGTCT CTATTTTTAA AACGCTTTAT TTTCAAGTGC TAACGGCGAT AACTATTGGT GTGTTGCTTG GCCATTTCTA CCCGGAAATC GGCGCTCAGA TGAAACCACT GGGTGATGGA TTTGTTAAAT TAATTAAAAT GATTATCGCG CCCGTCATTT TTTGTACCGT TGTTACTGGT ATCGCGGGCA TGGAGAGCAT GAAGGCCGTT GGCCGTACTG GTGCGATTGC ACTGCTCTAT TTTGAAATTG TCAGTACTCT GGCGCTGCTG ATTGGTTTAG TGGTGGTTAA CGTGGCGCAA CCCGGTGTTG GGATGAACAT CGATCCTGCG ACACTGGATG CTAAAGCGGT TGCACTTTAT GCTGAGCAAG CCTCACAACA GGGGATTATT CCATTCTTGC TGGATATTAT TCCCGGTAGC GTAGTTGGCG CATTTGCCAG CGGCAACATT CTGCAGGTCT TACTGTTTGC GGTCTTGTTT GGTTTTGCTT TACACCGTTT GGGTGAAAAG GGGCAGTTGA TTTTCAATGT TATTGAAAGC TTCTCCCGTG TTATTTTTGG TGTCATCAAT ATGATCATGC GCTTGGCACC GCTCGGGGCT TTCGGTGCGA TGGCCTTTAC TATCGGTAAA TATGGTGTAG GAAGTCTGGT GCAATTGGGG CAATTAATCC TCTGCTTCTA TTTGACCTGT ATTCTGTTTG TCGTTTTGGT ACTTGGCACG ATTGCGAAAT TCAATGGTTT TAATATCTTC AAATTTATCC GTTATATCAA AGAAGAGCTG TTGATCGTGT TAGGCACCTC CTCTTCTGAG TCAGTGCTCC CTCGCATGTT GGATAAAATG GAGAACGCCG GGTGTAAAAA ATCGGTAGTG GGTCTGGTTA TCCCAACGGG CTACTCATTT AACCTGGATG GCACCTCTAT TTACCTGACG ATGGCCGCGG TATTTATCGC TCAGGCAACT AACACCCATA TGGATATTAT GCATCAGGTG ACATTGCTGG TGGTGCTGCT GCTCTCCTCA AAAGGTGCGG CAGGTGTCAC CGGCAGTGGC TTTATCGTGT TGGCCGCCAC CATTTCTGCG GTTGGACATT TACCTTTGGC TGGGCTGGCA TTGATTCTGG GGATTGACCG CTTTATGTCC GAGGCTCGCG CCCTGACTAA TCTGGTGGGT AACGGTGTTG CCACCATTGT GGTCGCTAAA TGGTGTAAGC AACTGGACAA TGACCAACTG CAAGCGGTGC TATCCAATAA AGTGCTGCCT AATGTAAAAA GCAGTGTTTC TGTGTCCTGA
|
Protein sequence | MKVSIFKTLY FQVLTAITIG VLLGHFYPEI GAQMKPLGDG FVKLIKMIIA PVIFCTVVTG IAGMESMKAV GRTGAIALLY FEIVSTLALL IGLVVVNVAQ PGVGMNIDPA TLDAKAVALY AEQASQQGII PFLLDIIPGS VVGAFASGNI LQVLLFAVLF GFALHRLGEK GQLIFNVIES FSRVIFGVIN MIMRLAPLGA FGAMAFTIGK YGVGSLVQLG QLILCFYLTC ILFVVLVLGT IAKFNGFNIF KFIRYIKEEL LIVLGTSSSE SVLPRMLDKM ENAGCKKSVV GLVIPTGYSF NLDGTSIYLT MAAVFIAQAT NTHMDIMHQV TLLVVLLLSS KGAAGVTGSG FIVLAATISA VGHLPLAGLA LILGIDRFMS EARALTNLVG NGVATIVVAK WCKQLDNDQL QAVLSNKVLP NVKSSVSVS
|
| |