Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0091 |
Symbol | dppD |
ID | 6090793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 105938 |
End bp | 106918 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641595151 |
Product | dipeptide transporter ATP-binding subunit |
Protein accession | YP_001718857 |
Protein GI | 170022352 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.887805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTT TAAATGTAGA TAAATTGTCG GTGCATTTTG GTGACGACGC TGCGCCGTTC AAGGCCGTAG ACCGTATCAG TTACAGCATT GATCAAGGAC AGGTGGTGGG GATTGTCGGT GAATCCGGCT CCGGTAAATC GGTCAGCTCA CTGGCGATCA TGGGGTTGAT TGATTATCCC GGAAAGGTGA TGGCCGATAA GCTGGAATTT AACGGTCGCG ACCTGACCAA AATTTCGGAA AAAGAGCGGC GTCAATTGGT AGGCGCGGAA GTCGCGATGA TTTTCCAAGA CCCAATGACC AGCCTGAACC CGTGTTACAC CGTTGGTTTT CAGATTATGG AAGCGTTAAA GGTGCATCAG GGGGGCAATC GCAAAACTCG CCATCAGCGG GCGGTGGATT TGTTGACGCT GGTGGGTATC CCTGATCCTG CTTCGCGTCT GGATGTGTAT CCACATCAAC TCTCCGGTGG GATGAGCCAA CGGGTGATGA TCGCCATGGC GATTGCCTGT CGGCCTAAAT TGCTCATTGC CGATGAGCCA ACGACCGCGC TGGATGTGAC AATTCAGGCG CAGATTATTG AATTACTCTT GGAATTACAG CGGCGTGAAA ATATGGCGTT GCTGCTGATT ACCCATGATC TGGCACTGGT TGCAGAAGCG GCCCATCAAA TTATTGTGAT GTATGCGGGT CAGGTAGTTG AAACCGGCAA GGCGGCGGAA ATTTTCCGTG CGCCACGCCA TCCGTACACA CAAGCATTGC TACGCGCATT ACCGGAGTTT GCTCAGGATA AAGCGCGGTT AGCATCCTTA CCGGGTGTGG TACCGGGTAA ATATGACCGA CCAGAAGGCT GTCTGCTTAA CCCGCGTTGC CCGTACGCCA CTGATCGTTG TCGCGATGAA GAGCCTGAGT TACTGGGCAC ACCAGGGCGT CAGGTTAAAT GCCATACACC GCTTAATGAT GCGGGGAGGC CATCCCTATG A
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Protein sequence | MALLNVDKLS VHFGDDAAPF KAVDRISYSI DQGQVVGIVG ESGSGKSVSS LAIMGLIDYP GKVMADKLEF NGRDLTKISE KERRQLVGAE VAMIFQDPMT SLNPCYTVGF QIMEALKVHQ GGNRKTRHQR AVDLLTLVGI PDPASRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP TTALDVTIQA QIIELLLELQ RRENMALLLI THDLALVAEA AHQIIVMYAG QVVETGKAAE IFRAPRHPYT QALLRALPEF AQDKARLASL PGVVPGKYDR PEGCLLNPRC PYATDRCRDE EPELLGTPGR QVKCHTPLND AGRPSL
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