Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0089 |
Symbol | |
ID | 6090370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 103992 |
End bp | 105011 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641595149 |
Product | dipeptide transporter permease DppB |
Protein accession | YP_001718855 |
Protein GI | 170022350 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.297234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCAGT TCATACTCCG ACGTTTGGGG TTAGTTATCC CAACGTTTAT CGGCATTACT TTGCTGACCT TTGCTTTTGT CCATATGATC CCCGGTGACC CGGTGACCAT CATGGCGGGG GAACGCGGTA TCTCTGCCGA GCGTCATGCT CAAGTCATGG CGGAAATGGG GCTGGACAAG CCTCTCTATC AACAATATTT CCGCTATGTA AATGGCGTTT TACATGGTGA CCTTGGCATT TCGCTGAAAA GCCGTATTGC GGTATGGGAT GAGTTTGTCC CGCGCTTTAA AGCAACACTG GAACTGGGGA TCTGCGCGAT GCTGTTTGCT ATCGCAGTCG GCATTCCGGT TGGTGTGCTG GCAGCAGTGA AACGCGGTTC AATATTTGAT CACACCGCCG TGGGGATCTC CCTTACCGGC TATTCGATGC CTATCTTCTG GTGGGGCATC ATGCTGATCA TGCTGGTCTC GGTGCAATGG GACCTGACCC CGGTTTCCGG GCGTGTCAGC GATACCGTGT TCCTTGATGA CAGCCTGCCT CTGACGGGGT TTATGTTGAT TGATACCCTC ATCTGGGGGG AACCTGACGA TTTTAAAGAT GCGGTAATGC ATATGATTTT ACCGGCAATC GTCTTGGGGA CTATTCCCTT GGCGGTGATC GTGCGTATGA CTCGTTCCTC CATGTTGGAA GTGTTGGGGG AGGATTATAT CCGTACTGCG CGGGCCAAAG GGCTGAGCCG CATGCGGGTG ATTGTGGTCC ATGCGTTACG CAATGCCTTG CTGCCTGTCA TCACGGTGAT TGGTTTGCAG GTTGGTACCA TGCTGGCTGG GGCTATCTTG ACGGAAACCA TCTTCTCGTG GCCGGGTCTG GGTCGTTGGC TGATGGATGC ATTGCAACGC CGTGATTACC CTGTGGTGCA GGGGGGCGTG TTGCTGGTCG CGATCATGAT TATTTTAGTT AACTTGCTGG TAGATGTGCT CTATGGCGTA GTTAACCCGC GTATTCGTCA CAAGAAATAA
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Protein sequence | MLQFILRRLG LVIPTFIGIT LLTFAFVHMI PGDPVTIMAG ERGISAERHA QVMAEMGLDK PLYQQYFRYV NGVLHGDLGI SLKSRIAVWD EFVPRFKATL ELGICAMLFA IAVGIPVGVL AAVKRGSIFD HTAVGISLTG YSMPIFWWGI MLIMLVSVQW DLTPVSGRVS DTVFLDDSLP LTGFMLIDTL IWGEPDDFKD AVMHMILPAI VLGTIPLAVI VRMTRSSMLE VLGEDYIRTA RAKGLSRMRV IVVHALRNAL LPVITVIGLQ VGTMLAGAIL TETIFSWPGL GRWLMDALQR RDYPVVQGGV LLVAIMIILV NLLVDVLYGV VNPRIRHKK
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