Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0083 |
Symbol | |
ID | 6088247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 96333 |
End bp | 97664 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641595143 |
Product | regulatory protein UhpC |
Protein accession | YP_001718850 |
Protein GI | 170022345 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.644662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTTTT TCCTCAAAAG TCGCGATAAC GTACCGCCAG TAACGGATCA AACACAAATT GATTCATCCT ATAAGTATTG GCGTATCCAA TTAATGTGGA CGATGTATAT CGGCTACGCT GCGTTTTATT TCACTCGTAA AAGTTTCAAT TTTATTATGC CTGCTATGCT CACGGATCTA GGGCTGAGCA TGTCTGATGT CGGGATTTTA GGCACGCTGT TTTACATCAC TTACGGCTGC TCTAAATTTG TCTCTGGGAT GATCAGCGAT CGCTCAAATC CGCGTTATTT TATGGGGATC GGGTTGGTCA TGACGGGGAT TATTAATATC CTGTTTGGCA TGAGCTCATC ACTTTTGGTC CTTGGCGCCT TGTGGATCCT CAATGCGTTC TTCCAAGGTT GGGGCTGGCC ACCATGTTCT AAAATATTGA CCAGTTGGTA CTCGCGTTCT GAACGTGGTG GCTGGTGGGC TATCTGGAAC ACCTCACATA ACTTTGGCGG GGCGCTGATC CCCTTGCTCG TCGGGGTGAT TACTCTGCAC TTTAGCTGGC GCTACGGGAT GATCATCCCC GGAATTATAG GTGTGGTGAT TGGTTTGCTG ATGTGTTGGC GTCTGCGAGA TAAGCCAAGC ACCATGGGCC TACCAAGTGT GGGTAAATGG CGCAATGATG CGATGGAGCT GATCCAGGAA TCCGAAGGCC AGGGGCTGTC TAATAAAGAA ATTGTGAAGC GTTATGTCTT AACCAATAAA TATATTTGGT TGTTAGCCGT TTCCTATGTG CTGGTTTATA TCGTTCGAAC CGCGATTAAT GACTGGGGTA ACCTCTATCT GACCCAAGAG AAAGGTTATT CGTTGCTGAC CGCTAACTCT GCAATTTCAT TATTTGAAGT GGGTGGATTT ATTGGTTCAT TGGTCGCGGG TTGGGGTTCT GATAAGTGGT TCCGTGGCAA TCGTGGGCCG ATGAACCTGA TTTTTGCTAT TGGTATCTTC CTTTCAGTTG CATCACTGTG GACGTTGCCA AGCATCAGTT TTGTCTTACA GGCAGGCTGC TTCTTTGCGA TTGGTTTCTT TATTTTCGGG CCACAAATGC TGATTGGTAT GGCTGCTGCT GAGTGCTCTC ATAAGGATGC CGCTGGCGCT GCAACCGGCT TTGTTGGGCT ATTTGCCTAT TTAGGGGCGG CTTTATCGGG TTACCCTATC GCTCGCGTCA TGGAAATCTG GCATTGGAAT GGTTTCTTTG TGGTTATCTC TGTGGCGGCA TGTTTATCTG CTTTCTTCTT ATTGCCATTC CTGCGGGCGC AATCGCCGCA GTTAAAGCAA GCGACAACCT GA
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Protein sequence | MWFFLKSRDN VPPVTDQTQI DSSYKYWRIQ LMWTMYIGYA AFYFTRKSFN FIMPAMLTDL GLSMSDVGIL GTLFYITYGC SKFVSGMISD RSNPRYFMGI GLVMTGIINI LFGMSSSLLV LGALWILNAF FQGWGWPPCS KILTSWYSRS ERGGWWAIWN TSHNFGGALI PLLVGVITLH FSWRYGMIIP GIIGVVIGLL MCWRLRDKPS TMGLPSVGKW RNDAMELIQE SEGQGLSNKE IVKRYVLTNK YIWLLAVSYV LVYIVRTAIN DWGNLYLTQE KGYSLLTANS AISLFEVGGF IGSLVAGWGS DKWFRGNRGP MNLIFAIGIF LSVASLWTLP SISFVLQAGC FFAIGFFIFG PQMLIGMAAA ECSHKDAAGA ATGFVGLFAY LGAALSGYPI ARVMEIWHWN GFFVVISVAA CLSAFFLLPF LRAQSPQLKQ ATT
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