Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0077 |
Symbol | |
ID | 6088887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 86571 |
End bp | 88103 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595137 |
Product | histidine ammonia-lyase |
Protein accession | YP_001718844 |
Protein GI | 170022339 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACAA TAACACTACG TCCTGGTCAG ATGACGCTGG CTGACTTACG GCATATTTAT CAACATCCCG TACATATCAC ATTGGATGAA AGTGCCTATG TACCCATTCA GCAAAGTGTG GATTGTGTGC AAGCCATATT GGCAGAACAG CGCACGGCAT ATGGCATTAA CACTGGGTTT GGCTTGCTGG CCTCTACCCG TATCGCCACC GAAGACTTGG AAAACTTACA GCGCTCAATC GTACTCTCTC ACGCGGCAGG AGTCGGAGAA GCGAATGATG ATGCGATTGT GCGTCTGATT ATGGTGCTGA AAATCAATAG CCTGGCGAGA GGTTTCTCAG GTATTCGGCT GGAGGTGATT CAGGCGCTGA TTACCTTGGT CAATGCTGGG GTTTATCCGC ATATCCCGTT AAAAGGATCA GTGGGCGCTT CTGGCGATTT AGCTCCGCTG GCACATATGA GCTTGCTGCT ATTAGGTGAA GGAAAAGCCC GCTATCAGGG TGAATGGTTG CCCGCACACA CGGCACTGGC GCAAGCGGGT TTGCAGCCCC TCACACTGGC GGCGAAAGAG GGTTTGGCAC TACTTAACGG CACCCAGGTC TCTGCCGCTT ATGCATTGCG TGGTTTATTT GAGGCCGAAG ATCTCTATGC GGCCGCTTCG GTGTTTGGCT GCCTGACAGT GGATGCAGCA TTAGGATCCC GTAGCCCATT TGACGCCCGT ATTCACGCCG TTCGGGGCCA ACGTGGGCAG ATTGATGCTG CCAGCACTTA TCGTCATCTG CTTGGTGAAC GCAGTGAAAT CTCAGAATCA CACAAGAATT GTGACAAAGT GCAGGATCCA TATTCTTTAC GCTGTCAGCC ACAGGTGATG GGCGCATGTT TAGGCCAAAT ACGTCAGGCG GCAGAGGTGC TGGCTATTGA ATCCAATGCC GTTTCAGATA ACCCGTTGGT GTTTGCTGAA CAGGGTGATG TCTTGTCTGG TGGGAATTTC CATGCTGAAC CGGTCGCTAT GGCAGCAGAT AATCTGGCGT TGGCGTTGGC AGAAATCGGT TCATTATCAG AGTGCCGTAT CTCGTTGATG ATGGACAAGC ATATGTCTCA GTTACCTCCA TTTCTGGTAG AGAACGGTGG CGTAAATTCT GGCTTTATGA TTGCTCAGGT TACGGCTGCG GCGTTAACCA GTGAAAATAA AGGGCTGGCA TTCCCCGCCA GTGTCGATAG CATCCCAACA TCTGCTAATC AGGAAGATCA TGTCTCTATG GCCCCTCGGG CGGGTAAACG CTTGTGGGAA ATGGCTGAAA ATGTACGGAA TATACTGGCT ATCGAGTGGC TGGCTGCGTG TCAGGGGCTT GATTTGCGCA AAGGGCTAAG AACTTCCGCC ATACTGGAGC CCGCCCGCCA ACTATTACGC CAGCACGTCA CTTACTACGA TAAAGATCGT TTCTTTGCCC CCGATATTGA AGTTGCTAGC CAGCTTATTG CACAACGTCA TATGAATGAG TTGATGCCAG CAAAATTACT GCCAAGTCTT TAA
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Protein sequence | MKTITLRPGQ MTLADLRHIY QHPVHITLDE SAYVPIQQSV DCVQAILAEQ RTAYGINTGF GLLASTRIAT EDLENLQRSI VLSHAAGVGE ANDDAIVRLI MVLKINSLAR GFSGIRLEVI QALITLVNAG VYPHIPLKGS VGASGDLAPL AHMSLLLLGE GKARYQGEWL PAHTALAQAG LQPLTLAAKE GLALLNGTQV SAAYALRGLF EAEDLYAAAS VFGCLTVDAA LGSRSPFDAR IHAVRGQRGQ IDAASTYRHL LGERSEISES HKNCDKVQDP YSLRCQPQVM GACLGQIRQA AEVLAIESNA VSDNPLVFAE QGDVLSGGNF HAEPVAMAAD NLALALAEIG SLSECRISLM MDKHMSQLPP FLVENGGVNS GFMIAQVTAA ALTSENKGLA FPASVDSIPT SANQEDHVSM APRAGKRLWE MAENVRNILA IEWLAACQGL DLRKGLRTSA ILEPARQLLR QHVTYYDKDR FFAPDIEVAS QLIAQRHMNE LMPAKLLPSL
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