| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2245 |
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| Symbol | |
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| ID | 6120861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2373736 |
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| End bp | 2375370 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641650186 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_001776726 |
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| Protein GI | 170731293 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.298458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGCG ATAAACCGTT GACAAATTTA AATTTTTCTT CATTTGATCT GCATCCAGCG
TTGCTTACTG GGCTGACAAG AGCAGGATTT ACACTCTGTA CTCCGATCCA GGCGCTTACT
CTTCCGGTTG CACTGGCTGG TAGTGATATT GCCGGCCAAG CCCAAACGGG AACCGGGAAA
ACTTTGGCGT TTTTGGTGGT GGTAGTTAAC CGTTTACTTA GCCGTCCGGG GCTAGTTAAT
CGTAACCCAG AAGATCCGCG TGCGTTGATT TTGGCGCCAA CCCGTGAGCT TGCGATTCAA
ATCTATAACG ATGCAGTGAA ATTTGGTGGC AATCTTGGGT TGCGTTTTGC GTTGATTTAT
GGGGGCGTTG ATTACGATAA GCAGCGCGAA ATGTTGCGCA AAGGTGCGGA TGTGGTCATT
GCGACGCCGG GGCGCTTGAT TGATTACCTT AAGCAGCACG AGGTGGTTTC GTTGCGCGTT
TGTGAGATTT GCGTTCTTGA TGAAGCAGAT CGGATGTTTG ACCTGGGGTT TATCAAGGAC
ATTCGCTTTA TATTGCGGCG CTTGCCCGAG CGTTGTAGCC GTCAGACTTT GCTGTTCTCA
GCCACTCTCA GTCACCGCGT GTTGGAGTTG GCCTATGAGT ATATGAATGA GCCAGAGAAG
CTGGTGGCGG AAACGGAGAG TGTCACTACT ACGCGGGTCC GTCAACGTAT TTATTTCCCT
GCCGAGGAGG AGAAAATCCC ATTGCTGTTG GGTTTGCTCT CGCGTAGCGA GGGGATGCGT
ACTATTGTAT TTGTCAATAC AAAGGTGTTC GTCGAAGGTG TTGCGCGCGC GCTGGATGAG
GCTGGTTACC GGGTCGGTGT GCTGTCTGGA GATGTGCCAC AAAGGAAGCG AGAGACTTTG
CTTAATCGTT TCCAGAAAGG GCAATTGGAA ATACTGGTTG CCACAGATGT GGCTGCACGT
GGATTGCACA TTGATGGCGT TAATTACGTA TACAACTACG ACCTACCGTT TGATGCAGAA
GATTACGTTC ACCGTATTGG CCGCACTGCG CGTTTGGGAG CTGATGGTGA TGCGATTAGT
TTTGCCTGTG AGCGTTACGC GATGAGTTTG CCGGACATTG AGGCATATAT CGAGCAGAAG
ATCCCGGTTG CAGCAGTGAC TGCTGAGTTG TTGGCTCCAT TGTCGCGTCC TGAACGTGCA
TGGAATGGTA ACGGTGATAC TGTTGGAGAT ATTTCCTCAC ATTCTCGTGA CGTGTTGGTT
GCTCAGGAAT GGCGTCGGGG TAAGCCCAGG GGTAGCCCTG GAGAGCGCGA TGGTCGCACC
CGTGTAGGTA AAGGGCCCCG GTCGGATGGG GGAGGTGGGC GCCGCCGCAC TAAATTTCGC
TTGGAGACCG AGCGTGATTC CAGTGTGGAT GGGGCAGTCA CTCCTGTATT TGGAGTGTCT
ACGGGGATAG TATCTGCTCC AGGTAAAGAG GTGGGGCGAA ACCTCGGTCG CCGACGTCGT
AGTCGTTCAA TGGATTCTGG TGAAAGTGGC CATGTTGTCG CCACTACCGC CCAAGTGGCT
GCTAAGTCAG GTAGCCAACC GTCGCTCTTA GGTCGAATAG GGCACCGTAT CCGCTCGCTG
TTAAATATGT TCTAA
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| Protein sequence | MMSDKPLTNL NFSSFDLHPA LLTGLTRAGF TLCTPIQALT LPVALAGSDI AGQAQTGTGK
TLAFLVVVVN RLLSRPGLVN RNPEDPRALI LAPTRELAIQ IYNDAVKFGG NLGLRFALIY
GGVDYDKQRE MLRKGADVVI ATPGRLIDYL KQHEVVSLRV CEICVLDEAD RMFDLGFIKD
IRFILRRLPE RCSRQTLLFS ATLSHRVLEL AYEYMNEPEK LVAETESVTT TRVRQRIYFP
AEEEKIPLLL GLLSRSEGMR TIVFVNTKVF VEGVARALDE AGYRVGVLSG DVPQRKRETL
LNRFQKGQLE ILVATDVAAR GLHIDGVNYV YNYDLPFDAE DYVHRIGRTA RLGADGDAIS
FACERYAMSL PDIEAYIEQK IPVAAVTAEL LAPLSRPERA WNGNGDTVGD ISSHSRDVLV
AQEWRRGKPR GSPGERDGRT RVGKGPRSDG GGGRRRTKFR LETERDSSVD GAVTPVFGVS
TGIVSAPGKE VGRNLGRRRR SRSMDSGESG HVVATTAQVA AKSGSQPSLL GRIGHRIRSL
LNMF
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