Gene Xfasm12_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2223 
Symbol 
ID6120839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp2342034 
End bp2342702 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content45% 
IMG OID641650164 
Producthypothetical protein 
Protein accessionYP_001776704 
Protein GI170731271 
COG category[S] Function unknown 
COG ID[COG5619] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.892307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTGA CTCCGCAATG CATCAAAAAA GATATGGATG GACTGATTTC TAAATTAATT 
GAACAAGGCG TGTGTGACGA TTCAAACTTC TCTGCGATTC GATGTTCTGG GAGTAAAACA 
GAGATTAGCT TCAGCGGTGC GCAGCATCTT TCCATTGCAC TACGTGATAT CGAATACACG 
AAAATATATA GTGCACTCGC AGATAAGCGC TCATACAACA TGAGGCTTAT TGATGGGGCA 
CTGCTTCAAA TGATGTACCG CCTCGAAAAC GACAGCCTGC TCCAGCACCG GCTTGGCTTT 
TACCCTGCGC CACATCTGCG GCCCTTCCAA GATGACCCTG ACACATACGT TTGCGATGCG 
CTGTTTATGG AGATTGTGGA ACGTAGAATT GTTCCATTCC CATTACGTTT TGATTTTGAT 
GCGCGCGAAG GTATTTACGT TGATGGGGCG CATCCCAAAA GTCATCTGAC ATTAGGTGAT 
GTCACGGGGT GCCGCATTCC AGTGTCAGCA CCATTGACAC CGCGTTGGTT TGTTGAATTT 
GTTTTGAGGC ATTTTTATCA AACAAAGCAG CATGATTTCA TCAGCGGTCT GCCACAACAC 
AGCATGAAAT TTCAACCATC AATCACTCAA CATGAAGCAG ATTTGATGCA TCTGGTGATT 
CCATATTAG
 
Protein sequence
MRLTPQCIKK DMDGLISKLI EQGVCDDSNF SAIRCSGSKT EISFSGAQHL SIALRDIEYT 
KIYSALADKR SYNMRLIDGA LLQMMYRLEN DSLLQHRLGF YPAPHLRPFQ DDPDTYVCDA 
LFMEIVERRI VPFPLRFDFD AREGIYVDGA HPKSHLTLGD VTGCRIPVSA PLTPRWFVEF 
VLRHFYQTKQ HDFISGLPQH SMKFQPSITQ HEADLMHLVI PY