| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2208 |
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| Symbol | ipk |
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| ID | 6120824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2328414 |
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| End bp | 2329292 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641650151 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001776691 |
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| Protein GI | 170731258 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0005903 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGTCG TCATTGATGA CGGTGTGGGC TGGTCGGCGT GGCCGGCACC TGCCAAGTTG
AATTTGTTTT TGCAAATTAC CGGGCGACGT GTTGATGGTT ACCATGAATT GCAGACTGTT
TTTCGTCTGC TTGATTGGGG TGATACGATC CATCTGCGGG TGCGTGAAGA TGGTCAGATT
CATCGCATTG GTGAGTCAGT GACTGGGGTT GTTGAGGCCG ACGACTTGGT GGTGCGTGCG
GCTTATTTGC TAAAACATGC GACTAATGTT TATTTAGGGG CAGATATCTT TGTTGAAAAG
CGAATTCCAG TTGGTGGCGG CTTTGGCGGT GGGTCCTCTG ATGCGGCGAC TGTGCTTCTT
GTGTTGAATG CATTGTGGCA CACCAGGCTT GACGTTGCGG TTTTGGCGGC CTTGGGGTTA
CGTTTGGGGG CCGATGTGCC GGTATTTGTA CATGGGTGTA ATGCGTGGGC TGAGGGTGTC
GGTGAGTGTT TAACGCCGAT GATTCTGCCT GGAGCAGCTT ACCTGCTATT GGATCCAGGG
GTGTGTGTGC CGACACGGGA GCTGTTCCTT GATCCGGATT TGACGCGCGA TGCGTCCCCC
GCGACAATAG GCGACTTCAT TGCTGGTACT GCGTTTGGTA ATGCATTCGA GCCAGTTCTG
AGACGGCGCG AGTCTGCGGT TGCGGGTGCT CTTGATATGC TCTCAGAGGT TGGTTTTGCA
AGGGTGACTG GCTCTGGCAG CGGTTGCTTT GTGGAATTCA GTACGCGTGA TGAGGCTGAA
TGTGCTTTGG AGCGGCTGCC GTACGGGTTG TGTGCTTGGG TTGCTGATGG CGCTTCCCGT
TCTCCGCTGC TTGATGTACT GAAAACAATG GAATTTTGA
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| Protein sequence | MSVVIDDGVG WSAWPAPAKL NLFLQITGRR VDGYHELQTV FRLLDWGDTI HLRVREDGQI
HRIGESVTGV VEADDLVVRA AYLLKHATNV YLGADIFVEK RIPVGGGFGG GSSDAATVLL
VLNALWHTRL DVAVLAALGL RLGADVPVFV HGCNAWAEGV GECLTPMILP GAAYLLLDPG
VCVPTRELFL DPDLTRDASP ATIGDFIAGT AFGNAFEPVL RRRESAVAGA LDMLSEVGFA
RVTGSGSGCF VEFSTRDEAE CALERLPYGL CAWVADGASR SPLLDVLKTM EF
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