Gene Xfasm12_2202 details

Gene Information

• Locus tag: Xfasm12_2202
• Symbol: secE
• ID: 6120813
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: -
• Start bp: 2322390
• End bp: 2322797
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641650140
• Product: preprotein translocase subunit SecE
• Protein accession: YP_001776685
• Protein GI: 170731252
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0690] Preprotein translocase subunit SecE
• TIGRFAM ID: [TIGR00964] preprotein translocase, SecE subunit, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00000000618681
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAA AAATCGAACC TATTAAAAGC ACCGTTCTTA GCGGAGATAT TTTCAAATAC 
TTCATTGCTA GCTTGCTATT GGTGTTAGGG GTGTTTGTAT GGTTTTTGTT TAGTAGAGCT 
GTGGATTTTC TTATGCTAGG TTCTTGGGCT CCACAGTTGC GTGGTTTGGT TGTTATGCTC 
GTTTTCGTCG CTGCTGCATC GGTGCTTATG ACTACAGCAA AGGGCCGTGA ATTTCGTGGA 
TTCTTGTTTG AGTCCCGTTT TGAGTTGCGT AAGGTGGTCT GGCCTACACG TCAGGAGGCT 
ATTCGTATGA CTTGGGTTGT AATTGTCATG ATTACTATAC TCAGTCTGTT GTTGGGTGGC 
TTTGATTTCG TGATACAGAA GCTCACGCAG TGGTTCCTAT CGCGTTGA 

 

Protein sequence

MKTKIEPIKS TVLSGDIFKY FIASLLLVLG VFVWFLFSRA VDFLMLGSWA PQLRGLVVML 
VFVAAASVLM TTAKGREFRG FLFESRFELR KVVWPTRQEA IRMTWVVIVM ITILSLLLGG 
FDFVIQKLTQ WFLSR