Gene Xfasm12_2201 details

Gene Information

• Locus tag: Xfasm12_2201
• Symbol: nusG
• ID: 6120812
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: -
• Start bp: 2321819
• End bp: 2322376
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641650139
• Product: transcription antitermination protein NusG
• Protein accession: YP_001776684
• Protein GI: 170731251
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.00000000256386
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCGCT GGTATGTTGT TCATGCCTAT TCAGGTTTTG AGAAGTCAGT TGCGCAGGCG 
CTGCGTGATC GTATTTCTCG TATTGAGATT CAAGATCGTT TTGGTGATGT GTTGGTTCCT 
GCCGAAGAAG TTGTGGAAAT GCGTTCCGGT CAGAAGCGCC GTTCTGAACA CAAATTTTTC 
CCTGGCTATG TGTTGATTCA GATCGAAACT TATTATGAGG GTGGTGTGCC CCGAATCGAT 
AATGAATGCT GGCATTTGGT TAAGGAGACC CCGAAGGTAA TGGGCTTTAT AGGTGGTACT 
GCTGATCGCC CGTTGCCGAT CAGTAGTGAT GAGGCTGATG CTATCTTGCG TCGTGTTCAG 
GATGGGGCTG AAAAACCACG TCCTAAAGTT TTATTTGAGC CAGGGCAGAT GGTTCGAGTT 
ATAGATGGCC CCTTTAATGA TTTTGATGGG CTCGTAGAGG AAGTTAACTA TGAAAAGAAT 
CGTCTGCGTG TGGCGGTACT GATTTTTGGC CGTCCTACAC CTGTTGACCT TGAGTTTGGT 
CAGGTCCAAA AAAGCTGA 

 

Protein sequence

MKRWYVVHAY SGFEKSVAQA LRDRISRIEI QDRFGDVLVP AEEVVEMRSG QKRRSEHKFF 
PGYVLIQIET YYEGGVPRID NECWHLVKET PKVMGFIGGT ADRPLPISSD EADAILRRVQ 
DGAEKPRPKV LFEPGQMVRV IDGPFNDFDG LVEEVNYEKN RLRVAVLIFG RPTPVDLEFG 
QVQKS