Gene Xfasm12_2200 details

Gene Information

• Locus tag: Xfasm12_2200
• Symbol: rplK
• ID: 6120811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: -
• Start bp: 2321194
• End bp: 2321703
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641650138
• Product: 50S ribosomal protein L11
• Protein accession: YP_001776683
• Protein GI: 170731250
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0080] Ribosomal protein L11
• TIGRFAM ID: [TIGR01632] 50S ribosomal protein L11

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0000000723697
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGATG TCGGGACGCG TGCTTTTCTC GATATGATGG GGAGCCTGTT TCTAGAGCGC 
TATTACCCGG AGATATTTCA GGTGGCAAAG AAAGTTATTG CTTACATTAA GCTTCAGGTG 
AAGGCCGGTC AGGCGTCTCC TTCACCTCCC GTTGGTCCCG CTTTAGGGCA GCGGGGTTTG 
AATATTATGG ATTTTTGTAA GGCTTTTAAT GCTGGAACTC AAAAGGTTGA GCAGGGTTTG 
CCGATTCCGG TAGTAATTAC TGCTTACTCG GATCGTACTT TCACCTTTAT TACAAAAACC 
CCTCCAGCGT CGATTTTGTT GAAGAAAATT GTCGGTATAC AATCCGGGTC CAAGCGTCCC 
AACACAGAGA AGGTGGGCAA AGTCACTCGC AAGCAGCTTG AGGATATTGC TAAGACTAAG 
GAGCTCGATA TGACGGCTGC TGATTTAGAT GCTGCTGTAC GTACGATTGC AGGTTCGGCT 
CGCAGTATGG GTTTGGTGGT GGAGGGTTGA 

 

Protein sequence

MRDVGTRAFL DMMGSLFLER YYPEIFQVAK KVIAYIKLQV KAGQASPSPP VGPALGQRGL 
NIMDFCKAFN AGTQKVEQGL PIPVVITAYS DRTFTFITKT PPASILLKKI VGIQSGSKRP 
NTEKVGKVTR KQLEDIAKTK ELDMTAADLD AAVRTIAGSA RSMGLVVEG