| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2199 |
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| Symbol | rplA |
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| ID | 6120810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2320491 |
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| End bp | 2321189 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641650137 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001776682 |
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| Protein GI | 170731249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000441235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACAGA CAAAGCGTCA AAAAGCTATT GATCTCGCTG TTGTCCCTGG TAAGTCTTAT
GGGATTGATG AAGCGATTAA AATTCTAAAA ACGGCCACTA AGGCTAAGTT TATTGAATCA
GTGGATGTTG CCATACGTTT AGGTGTGGAT GTGAAAAAGT CGGATCAACA GGTCCGAGGT
TCGACTTTGT TGCCCGCTGG AACTGGTAAG GCTGTACGTG TGGCTGTGTT TGTTCCATCT
GGCGCTAAAG CGGAGGATGC TTTAGCTGCT GGTGCTGATG CGGTCGGTAT GGATGATTTG
GCTGAGAAGA TGCAGGCGGG CGATCTAAAT TACGACGTCG TGATTGCTAC TCCGGATGCG
ATGCGTGTTG TTGGTAAGTT GGGTACTTTG CTTGGGCCTC GTGGTCTTAT GCCTAATCCG
AAAGTTGGTA CGGTATCTCA AAATCCTGGT GAAGCTGTTA AGAATGCTAA ATCTGGCCAA
GTTCGTTATC GTGCTGACAA GGCTGGCATC ATTCATTGTG TGATTGGTAA GGTGAGTTTT
GACGATGAAG CATTGAAGTT AAACTTACAA GCATTGTTAG TTGACTTAAT TAAAATCAAA
CCGACTGCTT CTAAAGGTAC TTATTTGCAA AAAGTGTCAT TGAGTTCTAC TATGGGTCCA
GGCGTAATGA TTGACCAATC TACTTTATCT CTTAAGTAA
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| Protein sequence | MVQTKRQKAI DLAVVPGKSY GIDEAIKILK TATKAKFIES VDVAIRLGVD VKKSDQQVRG
STLLPAGTGK AVRVAVFVPS GAKAEDALAA GADAVGMDDL AEKMQAGDLN YDVVIATPDA
MRVVGKLGTL LGPRGLMPNP KVGTVSQNPG EAVKNAKSGQ VRYRADKAGI IHCVIGKVSF
DDEALKLNLQ ALLVDLIKIK PTASKGTYLQ KVSLSSTMGP GVMIDQSTLS LK
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